| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2679 |
|---|
| Symbol | |
|---|
| ID | 6782676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3102273 |
|---|
| End bp | 3103592 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642768672 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_002139481 |
|---|
| Protein GI | 197119054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATCA TAATTAACGT AGCTTTGGCT TTTGCATTCG TGCTTATTTC CGTACCGGCA
TTTGCTTTTC ATTCTGGCGG CGTCGCTGAG TGCGAAGGTT GCCACTCGAT GCACAACTCG
TTTGAAGGTG CCGCCAATGT GACCGGCATG ACCCAGTATC AGTCCGGTCC GTACCTCCTG
AAAGCTCAGG ACCAGTCCGG TGCTTGCCTC AACTGCCACC AGGCTGCTGA CACCACCCCC
GGCCCCGTTA CCGGCAAGGA CAATGGCTAC CACATCTCCA CCGCAAACGT TGTTGCAAGT
GACAGCACCA CCCCCGTTGA ATTAACCCCT GGTGGCGACT TTGCCTGGCT AAAGAAGACT
ATCATTGGGT ACTTGCGTGG CCCCATAGTT TTTGAAGGCG ACCGTCACGG CCACAACGTC
ATCGCTGTCG ACTTCGGCTA CACCCAGGAC AAGGTCCTGA CTGTTGCCCC TGGTGGCACC
TATCCGGCAG CCAACCTGGC CTGCTCCTCC TGCCACGATC CCCATGGCAA GTACCGTCGT
CTTGCTGACG GCACCAAGGC CACTACCGGT CTGCCGATCT TTAACTCCGG TTCCTACGTC
AACAGCAAAG ACCCGATCGC CAGTGTTTCC GCCGTCGGCG TGTATCGCCT CCTCGCAGGT
GTTGGCTACC AGCCGAAGTC CCTTACCGGC TCCTACGCCT TTGCGAACCC GTCTCCGGAC
GCAGTTGCTC CGAGCAGTTA CAACGGTCTC AACGACACCA TCGCAGGCGG TAAAGACCGC
GTTGCTTACG GCCAAGGTAT GTCCGAGTGG TGTGCTAACT GCCACACCGC AATGCACAAT
GACACCTATG CCTCCGGCAC CAAAGGGCTG GTTCACCCTG CAGGCAACGG CGCCAAGCTG
CCGGCCGCCA TCGCCGGCAA CTACAACTCC TATGTTTCCT CTGGCATCAA CGGCACCCCG
GCTTCCAACG GCTACAGCGC CCTGGCTCCG TTCGAACTCG GTTCAGCTGA CTATGCCGCC
ATCAAAACCT TCCAGGCTGC TCCGACTGCC GCCAACACCA GCAACAACGT GCTCTGCCTC
TCCTGCCACC GCGCCCATGC TTCCGGCTTT GAGAGCATGG CCCGCTACTA CCTGGGCAAC
GAGTTCATGA CCGTCGCTGA CGCAAGCAAC GCAGCCGCTT ACGACTCCAG CACCACCGAG
AACAAGATCA ACACCGGCTA CAGCGTCACC CAGCAGCAGA TGGCGTACAA CGGTCGTCCG
GCTTCACTCT TCGGACCGTA CGCACGTGAC TACTGCAACA AGTGCCACGC CAAAGACTAG
|
|---|
| Protein sequence | MKIIINVALA FAFVLISVPA FAFHSGGVAE CEGCHSMHNS FEGAANVTGM TQYQSGPYLL
KAQDQSGACL NCHQAADTTP GPVTGKDNGY HISTANVVAS DSTTPVELTP GGDFAWLKKT
IIGYLRGPIV FEGDRHGHNV IAVDFGYTQD KVLTVAPGGT YPAANLACSS CHDPHGKYRR
LADGTKATTG LPIFNSGSYV NSKDPIASVS AVGVYRLLAG VGYQPKSLTG SYAFANPSPD
AVAPSSYNGL NDTIAGGKDR VAYGQGMSEW CANCHTAMHN DTYASGTKGL VHPAGNGAKL
PAAIAGNYNS YVSSGINGTP ASNGYSALAP FELGSADYAA IKTFQAAPTA ANTSNNVLCL
SCHRAHASGF ESMARYYLGN EFMTVADASN AAAYDSSTTE NKINTGYSVT QQQMAYNGRP
ASLFGPYARD YCNKCHAKD
|
|---|
| |