Gene Gbem_2668 details

Gene Information

• Locus tag: Gbem_2668
• ID: 6782665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 3087270
• End bp: 3089159
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642768663
• Product: superfamily I DNA and RNA helicase-like protein
• Protein accession: YP_002139472
• Protein GI: 197119045
• COG category: [R] General function prediction only
• COG ID: [COG3973] Superfamily I DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.111087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTG TGCAACAGGA AGTGAAGCGG CTGGACGGGA TTCATGAGGC AATAGAGCGG 
TACGCGGTCG ACCGCCTGCG GACGATAGCG AAGCACGAAG CATATACGAA GGAACTGGAA 
CAGGAGCGCC TTAACGCGGT GGGGTGGCAC GAGAAGAACG ACCTCACCGA GAAGCTGGTT 
GAGCACGGCC ACCACTCTCC ACGCAAATAC CTTCACGAAT ACACACAGCA AGCCTCCCCT 
TACTTCGGCA TTCTCGGCAT CCACGACAAC GATCGAAGGA TCGGCAGAAA AGAATACCTG 
ATCGGCAACC AGACGCTCAT GGACGGTCAG CGGGTCGCCA TCGTCGACTG GAGAAAGGCC 
GAGATCACCG GCCCCTTCTA CGAGGGTTAT GACGTGGGCG AGGAGTACGA ACTCACCATC 
AGAGGTGTCG AGAGGGAAGG GGTGATCACC CGCAGGGACA AGGTGACCAT AAACAGGAAG 
GCCCTGAACC GGATCGAGAC ACCTTCGGAG GTGTACGAGC TGCGCGGCGG GGAGTGGCAT 
AACAACGGAT CGGCCTGCGA GACGAGCGCG GATACGAAGG AGCGGACCGA GGACCACCGG 
ATGGTGGATT CGATTGCGTC CCTGATCTCC CCGGAGCAGT TCCGGGCTAT TACCAAGCAG 
AGGGAAGGGG TGGTGGTGAT AAACGGAGCG GCCGGCGCGG GGAAGACCAC TGTGGCGCTG 
CACCGGCTTT CCTTTCTCAT GTTCGACGCG CCGGAGAAGT ACCGCCCGGA GCGCTGCGTC 
GTTCTCATGT TCAACCGGGT GCTGCGCGAC TACGTGAAGC AGAGCAGCGA TACCCTTCTT 
GGACCGGTCC GGGTGGATAC CTACAGCGCC TGGTCGCTGA CGGCCCTTGC CGCTCTGGGT 
GTCCACTCGC TCAAAACGAG TTTCGACGAC CCCTTTGGCG CGCAGAAGAA AAGCAGCATG 
ATGCCGGCCA TGCTGGCCAA GTACGTGAAG GAGACGGCAA AGATAGAACC AGTCACCGAT 
CTTTGGCGTT TCCTGATGCA GGAGTACGTG GTTGCCGCGC TGTTTCCTGA TTCAGGGGAG 
GCGTTCCAGC AGGAGGCCCA AAGGAAGTTC GAAGCAAAGG AGCGGGTGCT CTCTTTCTCG 
GATATCAGCA TCCTGCTGCG TCTGGCACAA CTGCGGCGAC CTGCCGGGAC CGTCGTCCTG 
GGGGCGCTGA ACGCCTACGA CCACATCGTG GTCGATGAGG CGCAGGACCT CTCCTCGCTC 
GAACTGCGTA CCATCGTGGC CGCTACTTCC CCTGCGCGCA GCATCACCAT ATGTGCCGAC 
GAGAAACAGC AGATCCTCAG CTTCCTCGAT TCCCAAGGGT TTTCGAGCGT CATGGCCCAG 
CTCCACTCGC AGGGGCTCGA AAAGGAGAAC CTGACGGTTT CTTACCGTTG CCCCAAGGAA 
ATCGTCGATC TCGCTGCCCA GGTCAGCGGC AGGAAGGTCG ATACTTCGAA GGCTCACACC 
GGCGTGGTTG AGTTTCACGC GACTAAGAAC GCCGCGGAGT CGATGGCGAA GATCCGGCAG 
ATCGTTGAAG GACTAGTACA GGCTGCTCCG GGCTCTCTTG CCGGCGTAAT TTGCAAGAAG 
AAAGCAGACG TAAAGGCACT TCATGCCGCG CTTGCCGGCG TCCAAGGGCT GCACCCGGAG 
GGGGAGATAT CCTTTTCGCC CGGCGTCCAG GTGATTCATG CTCATGCGAT AAAGGGGGTC 
GAGTTCTCCC ACGTCATCCT CTACAACCCC AGCTCGTACG ACTACCGCCA GACGGAGCCG 
GATAGGAACC TGCTTTACGT GGCGATTACA CGCGCTTGCA AGACCCTGCA CATCGTTCAC 
CATCAGGCGT TGGCGAAGGG GCTTGGTTGA 

 

Protein sequence

MEIVQQEVKR LDGIHEAIER YAVDRLRTIA KHEAYTKELE QERLNAVGWH EKNDLTEKLV 
EHGHHSPRKY LHEYTQQASP YFGILGIHDN DRRIGRKEYL IGNQTLMDGQ RVAIVDWRKA 
EITGPFYEGY DVGEEYELTI RGVEREGVIT RRDKVTINRK ALNRIETPSE VYELRGGEWH 
NNGSACETSA DTKERTEDHR MVDSIASLIS PEQFRAITKQ REGVVVINGA AGAGKTTVAL 
HRLSFLMFDA PEKYRPERCV VLMFNRVLRD YVKQSSDTLL GPVRVDTYSA WSLTALAALG 
VHSLKTSFDD PFGAQKKSSM MPAMLAKYVK ETAKIEPVTD LWRFLMQEYV VAALFPDSGE 
AFQQEAQRKF EAKERVLSFS DISILLRLAQ LRRPAGTVVL GALNAYDHIV VDEAQDLSSL 
ELRTIVAATS PARSITICAD EKQQILSFLD SQGFSSVMAQ LHSQGLEKEN LTVSYRCPKE 
IVDLAAQVSG RKVDTSKAHT GVVEFHATKN AAESMAKIRQ IVEGLVQAAP GSLAGVICKK 
KADVKALHAA LAGVQGLHPE GEISFSPGVQ VIHAHAIKGV EFSHVILYNP SSYDYRQTEP 
DRNLLYVAIT RACKTLHIVH HQALAKGLG