Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2666 |
Symbol | |
ID | 6782663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3084865 |
End bp | 3086031 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768661 |
Product | glucose/sorbosone dehydrogenase-like protein |
Protein accession | YP_002139470 |
Protein GI | 197119043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000177131 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAGCA TGCGGAAACT CGTCCTAAAT GTGGCTGCGG CCTGCGCCTT GGCAGCCGTC TTTGCGTCCG TCGCCTGCAG CAGGGAGAAC GGGCCATCAA CGCAGGCAAC GGGGTTCCCG ACCAGCATCA CCCTGACGCC GGTTGCCAAG GGGCTGAAGC AGCCGACAGC CATCGCCAAC GCTGGGGACG GGACCAACAG GCTGTTCATC CTGGAACAAC GAGGGACGGT GCGGATACTG CGCAACGGCG TTCTCGGCAG CGAGCCTTTC CTCGACATTC GGCGGCAGGT AAGGTCAGGC GGGGAACAGG GGCTGCTGGG GATCGCCTTC CCCAAGCAGT TCCGCTCCGC CAAAACCTTC TACGTGAACT ACACCAACAG GGTCGGCGTA GGGAACACGG TGGTAGCGAG TTTCAAAGTA AGCACAGACC CCGACCATGC AGATAACGCC TCGAAAAGAG AGATACTTGG CATCGTCCAA CCCTATGCCA ACCACAACGG GGGGGAGCTG GCCTTCGGGC CCGACGGTTT TTTGTACATA GGGACCGGCG ATGGGGGGAG CGCGGGGGAC CCGCACGGAA ACGGGCAGAA GCGTAACACG CTGCTGGGGA AGTTGCTGAG GATAGAGGTA GGAACGGGCG CAGCCCCCTA TGCCATCCCC AAGGGCAACC CCTTCGGCAA CGAGATATGG GCCTACGGGC TGCGCAACCC CTGGCGCTTC TCCTTCGACC ACGTGAGCGG GGACCTGTAC ATTGGCGATG TAGGTCAGAA CGAGGTGGAG GAAATCGATT ACTTGGCGAC AGGCACCGGT AAGGGAGCGA ACTTCGGTTG GAACGTCATG GAGGGGAGTC GCTGCTTCAA GAAGGAGAAG TGCGACAAGG CCGGCATGGT CCCGCCGGTT GCTGAATACT ACCACGGCAA AGGAGACTGT TCTGTGACCG GCGGATATGT CTACCGAGGG AAGCTGGAGC AGCTAAAGGG CATCTATCTT TACGGAGACT TCTGCAGCGG ACGGATCTGG GGGCTGCGCC AAAGCGGCGG TAGATGGGTG AGCCGGCTCC TTCTTGAGAC TCCATACCGG ATTTCGACGT TCGGTGAGGA TGAACAAGGT GAGATTTATG TAGCCGACTA CGGCGAAGGC ACAATCTATC GCATAGGCAT CCCATAA
|
Protein sequence | MTSMRKLVLN VAAACALAAV FASVACSREN GPSTQATGFP TSITLTPVAK GLKQPTAIAN AGDGTNRLFI LEQRGTVRIL RNGVLGSEPF LDIRRQVRSG GEQGLLGIAF PKQFRSAKTF YVNYTNRVGV GNTVVASFKV STDPDHADNA SKREILGIVQ PYANHNGGEL AFGPDGFLYI GTGDGGSAGD PHGNGQKRNT LLGKLLRIEV GTGAAPYAIP KGNPFGNEIW AYGLRNPWRF SFDHVSGDLY IGDVGQNEVE EIDYLATGTG KGANFGWNVM EGSRCFKKEK CDKAGMVPPV AEYYHGKGDC SVTGGYVYRG KLEQLKGIYL YGDFCSGRIW GLRQSGGRWV SRLLLETPYR ISTFGEDEQG EIYVADYGEG TIYRIGIP
|
| |