Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2660 |
Symbol | |
ID | 6782657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3080262 |
End bp | 3080921 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642768655 |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_002139464 |
Protein GI | 197119037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT ATCTTGATCA CCTAGAGGAG GCTATCATCA CCTTCCTTAT TGGTGCGGCC ACCCTGGTCA TTTTTCTTTC GATTCTACAT CGTTATGCGG CGGGGCTTCC TATCCCGGGG CTCCAGGACT GGCTGATCGA CATCCGGTTC AGCTGGGCTC AAGAGCTTTG CATTTATATG TTCGTCTGGA TGGCTAAGTT CGGGGCCGCC TACGGCGTGC GTTCCGGCAT CCATGTGGGG GTGGACGTTC TGGTGAACAG GCTCCCGGCG GAGTGGCGCA CGAAAGGCGT CTTGCTGTCT ATTCTCTGCG GCGTCATCTT TACCGGCATC ATCGGCACCC TCGGGGCCAC CTTCGTCTGG GAGAACGGTC TTCACTACGC TCTCTTCCAT AAGCTGGGCA TCCCCACGGG AGATGTTCCG GAAGGGCCCA TCACGCCGGA CCTCGAGTGG CCCACCTGGT TCATTTATTC CGCGGTTCCT CTGGGCTCCT ATCTGATGTG CTTCAGGTTC CTGCAGGTCG GTTGGCGCTT CCTCAAGACA GGAGAGCTGC CGCACAGCCA CGATGAATCG CACGTAGAGG GCCTTGAGGA AGAAGCCATC GAGCATTCCC CGCTTACCCA GAGCAAACCC GATCTTGCCG CCGGAGGTAC CGCAAAATGA
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Protein sequence | MMKYLDHLEE AIITFLIGAA TLVIFLSILH RYAAGLPIPG LQDWLIDIRF SWAQELCIYM FVWMAKFGAA YGVRSGIHVG VDVLVNRLPA EWRTKGVLLS ILCGVIFTGI IGTLGATFVW ENGLHYALFH KLGIPTGDVP EGPITPDLEW PTWFIYSAVP LGSYLMCFRF LQVGWRFLKT GELPHSHDES HVEGLEEEAI EHSPLTQSKP DLAAGGTAK
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