Gene Gbem_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2660 
Symbol 
ID6782657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3080262 
End bp3080921 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID642768655 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002139464 
Protein GI197119037 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT ATCTTGATCA CCTAGAGGAG GCTATCATCA CCTTCCTTAT TGGTGCGGCC 
ACCCTGGTCA TTTTTCTTTC GATTCTACAT CGTTATGCGG CGGGGCTTCC TATCCCGGGG
CTCCAGGACT GGCTGATCGA CATCCGGTTC AGCTGGGCTC AAGAGCTTTG CATTTATATG
TTCGTCTGGA TGGCTAAGTT CGGGGCCGCC TACGGCGTGC GTTCCGGCAT CCATGTGGGG
GTGGACGTTC TGGTGAACAG GCTCCCGGCG GAGTGGCGCA CGAAAGGCGT CTTGCTGTCT
ATTCTCTGCG GCGTCATCTT TACCGGCATC ATCGGCACCC TCGGGGCCAC CTTCGTCTGG
GAGAACGGTC TTCACTACGC TCTCTTCCAT AAGCTGGGCA TCCCCACGGG AGATGTTCCG
GAAGGGCCCA TCACGCCGGA CCTCGAGTGG CCCACCTGGT TCATTTATTC CGCGGTTCCT
CTGGGCTCCT ATCTGATGTG CTTCAGGTTC CTGCAGGTCG GTTGGCGCTT CCTCAAGACA
GGAGAGCTGC CGCACAGCCA CGATGAATCG CACGTAGAGG GCCTTGAGGA AGAAGCCATC
GAGCATTCCC CGCTTACCCA GAGCAAACCC GATCTTGCCG CCGGAGGTAC CGCAAAATGA
 
Protein sequence
MMKYLDHLEE AIITFLIGAA TLVIFLSILH RYAAGLPIPG LQDWLIDIRF SWAQELCIYM 
FVWMAKFGAA YGVRSGIHVG VDVLVNRLPA EWRTKGVLLS ILCGVIFTGI IGTLGATFVW
ENGLHYALFH KLGIPTGDVP EGPITPDLEW PTWFIYSAVP LGSYLMCFRF LQVGWRFLKT
GELPHSHDES HVEGLEEEAI EHSPLTQSKP DLAAGGTAK