| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2645 |
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| Symbol | |
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| ID | 6782642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3062034 |
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| End bp | 3063752 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768640 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002139449 |
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| Protein GI | 197119022 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000110346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA AGTGTCTAGC GCTCCTTTCC CTCACTTTGT TAATTAATGC CTGCGCCAGC
GAGCACGCCG CCGGCACGAT CCCTTCGGCC GGACTCGAGG CTGTTGCGGC CCCGTCGGCC
GGTCCCGGAG AGGGACGCAC CATGTACCTC TTCGCCTTGG CGCGTCTGCG TGCCACCGAG
GGGGATCAGG ATGCGGCGCT CGTGCTTTTG CGCCAGGCGA TGGAATCCGA CCCGGCGGCA
GCCTACCTGC ACACGGCGGC GGCCCAGATC CTCTTGCAGC AGAATAAACC CGAGGAGGCG
CTGGTCGAAA GCCAGACCGC CATCAATACC GACCCCGCTT TCCTGCAGGC GCAGCTTCTT
TCAGGGAACA TCCTGATGAC CATGCAGCGC GAGAAGGAGG CCATCCCCTA TTACAAGAAG
GTGATGGAAC TCGACCCGAC GAAAGAAGAG GTCTACCTCC ACGTCGCCAT CTATTACCTT
AAGAGTTTCG AGTACGAGCA GGCGGTCGAC ACCCTGAAGG CGTTGGTCAA GGCTTCGCCC
GATTCGGCGC TCGGCTACTA CTACCTTGCC AAGACCTACG AGCAGATGCG TCTGCCGCGC
GAAGCGCTCG GCTACTACAA GAAGGCCCTC GATTTGAAGC CGGACTTCGA GCAGGCGCTG
ATAGAGATGG GGATCTCGCA GGAGACCCAG GGGCTCATCC CCGACGCCAT CGAGAGCTAC
AAGGGGCTTC TCGATATCAA CCCTGCCAAC GCCAACGTCG TGCAGCATCT GGCGCAGCTC
TACATCCAGC AGAAGCGGCT TAGCGAGGCG CTCGCCCTGT TGCAGGAAAA GGGGGGGAAG
ACCCTCGAGA ACTCCCGCAA GATCGGGCTT TTGTTCCTGG AGCTGGAGCG CTACGACGAT
GCGGTGAAGA CCTTCCAGGA GATCCTCGAG GTAGAGCCTG CCTCCCAGCA GGTCCGCTTT
TACCTCGCCA CCGCCTACGA AGAGAAGGAT GCTGCCGACC TGGCCATCGC CGAATTCCTG
AAGGTCCCCA AGGAGTCTCC CTACTATCCC GATGCAGTCG GCCACCTGGC CTACCTGTAC
AAGGAGAAGG GGACCCCGGA GAAAGGGATC GCCCTCCTGA AGGAAGAGGT TAAGGATCAG
CCTTCGAGGG TCGAGCCGTA CCTGCATCTG GCCGGCCTCT ACGAGTCGAT GGAGCGCTAC
CGGGAAGGGG TCGACACGCT GAATTCCATG GACGACAAGC TCCAGAACGA CCCCCGCGTA
TTGTTCCGCC TCGGCATCCT GTACGACAAA CTCGGGCAGA AAGAGCAGTC GGTCGCCATG
ATGAAGCGGG TTATCGCCGC GACCCCGGAC GACGCCAACG CGCTCAACTA CCTGGGGTAC
ACCTATGCGG AGATGGGGGT GAACCTCGAG GAGGCGCTTT CCTACCTGAA GAAGGCGGTC
GAGCTGAAGC CGGACGACGG CTTCATCATG GACAGCCTCG GCTGGACCTA CTTCAAGCTC
AAGCGCTACA ACGAGGCGGT CGCCCAACTG GAGCGGGCAG CGGAGCTCTC CGACGAGGAC
GCCACGGTGC TCGGACATCT CGCCGACGCC TACTGCGCCG CCCGTTCCTA TAAGAAGGCG
CTCCCGCTGT ACCGGAAGCT GCAGAAGCTG GAGCCCGAGC AGAACGCCGA GCTCGCCGAG
AAGATCAGGC ACTGCCGCCA GGAGAGCGGG GAAAAATGA
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| Protein sequence | MTKKCLALLS LTLLINACAS EHAAGTIPSA GLEAVAAPSA GPGEGRTMYL FALARLRATE
GDQDAALVLL RQAMESDPAA AYLHTAAAQI LLQQNKPEEA LVESQTAINT DPAFLQAQLL
SGNILMTMQR EKEAIPYYKK VMELDPTKEE VYLHVAIYYL KSFEYEQAVD TLKALVKASP
DSALGYYYLA KTYEQMRLPR EALGYYKKAL DLKPDFEQAL IEMGISQETQ GLIPDAIESY
KGLLDINPAN ANVVQHLAQL YIQQKRLSEA LALLQEKGGK TLENSRKIGL LFLELERYDD
AVKTFQEILE VEPASQQVRF YLATAYEEKD AADLAIAEFL KVPKESPYYP DAVGHLAYLY
KEKGTPEKGI ALLKEEVKDQ PSRVEPYLHL AGLYESMERY REGVDTLNSM DDKLQNDPRV
LFRLGILYDK LGQKEQSVAM MKRVIAATPD DANALNYLGY TYAEMGVNLE EALSYLKKAV
ELKPDDGFIM DSLGWTYFKL KRYNEAVAQL ERAAELSDED ATVLGHLADA YCAARSYKKA
LPLYRKLQKL EPEQNAELAE KIRHCRQESG EK
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