| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2602 |
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| Symbol | |
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| ID | 6782599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3015316 |
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| End bp | 3017445 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768597 |
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| Product | lytic transglycosylase catalytic protein |
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| Protein accession | YP_002139406 |
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| Protein GI | 197118979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.178637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACC GCACCGCCAT TGCCGCAGCC GCCGTACTTT TCTGCACCGC CCTTCCCGCC
TCAGCACTGA CCTTCAAGCC CGCCGACGAA GCACTGGCAA GCGCCGCCTC CCGCATGCAG
GCCAAGGATT ACCGTACTGC CAAAGAAGCT GCGTCGAAAG TAAACGACAA AGGCGTCCGC
AGCTTCATGG TCGGCATGGC GGCGGCCCGG CTGGAGCAGT GGGAAGAGGC GGCAGCACAG
CTTCCCGCCG CGGCGGAGGG GTACCCGATC CTCGCCGATT ACGCGCTCTA CTACCAGGGG
CTCTCCTTGG CCAAGTTGGA GCGGCACGAT CAGGCTCTGA CTCCCTTGTA CCGGCTCCTC
AAACATTACC CGGAAAGCCG CCTGGTGCGC GCAGCGCTCA TCCTGTACGC CGACACCCTC
GCGGCGGCGG GCCATTACAA CGAGGCTCAA CAAAGTTACG CCACCTTCGT CGAGCGCTAC
CCGTCCGGCA GCGACTCCAT CTCCGCGCTC TACGGCTCCG CCCTTTGCAA GGAGAAGCTT
GGCGACCCGA TTGCGGCGGC GAAAGTCCTG CGCGGCATCT ATCTCAACTA CCCCGCCTCC
TCCTTTTCCG ACAAGTCCGC CCGCGACCTG CAAAGGTTAA CCGGCGCCGG GACCAAGGTC
GATCCGTACA CCAGCGCCGA ACTCTTCAAG CGCTGCGGCA CGCTGTACGG ACTGGGACGC
TATCTGCAGG CGGCAGAGGC CTACGCGGAG ATACCGCTTT CCGGGGAGAG CGCCGATTTC
GTCGCCAAGC TCAAGCTGAA GAAGGGACAG GCGCTCTATA AGGCAAGGCA CTACCAGCAG
GCGCAGGCGA CCTTCTCCAA CATCTCCGGC GCCCGCCACG AATCAGATCT CTGGCTGGCG
CGGACCCTGG ACAAGACCGG GGAGCAGGAC CAAGCCTTCA AACTGTACAT GCAGCTGGCG
CAGGACCGGG ACAGCGGGAA TGCCGGCCAG GAGGCGCTCC TGGAGGCGGC ATACCTGAAA
AGGTTCCAGC GCAAGTGGAG CGAGGCGCTG CCGCTTTTCA AGCAATACCT GACAGCCGTC
CAGCAGAAAC CTTCCAACGT GCTCTGGGAG TCCGCCTGGG CCAGCTACCA GTCCCGCAAT
TACGAAGATG CCGCCGCGCA GTTCAAAAAG CTCACCGAGC GCGAAGACCT GCGGGACAAG
TCGCTCTACT GGCTGGGCAA GACCCTCGCC GCCACCGGCG ACGCCAAAGG TGCGCAGCAG
GCGTTATCGA CCCTGGCAGC GGAATTCCCG CTCGGGTACT ACGCCCTGAT CAGCAACAAC
CACGCGGGGG AAGAGCTTCC GCTCCCCCCA AAGAGCATCA CCGAGGCGCT CCCCATGCCT
TCTGGTTTCG AGCGGGAAAA GGCGCTGATC TCGCTCGGAT TTTACGATGA GGCGGTCAGG
GAACTCTCGA TCGGCAAGAA GAACAGGAGT GCTGCGGGGA TCGCCCGGCT CTACCTGGAG
ATGGAGAACT TCAACGGCGC CTTCCACGCC ATGTCCAATG AGAAGCCAAA GCGCGGCGAC
AAGGACAACG CCACCATCTG GGGGGTCGCC TACCCGCTCG CGTACAAAGA GGACGTGGCG
CGCCACGCAG CCGCCAACGC CATACCGGAA AGCCTCGTCT ACGCCGTCAT GCGCCAGGAG
AGCAACTACT TCCCGGCGGC TCTCTCGCCC GTCGGCGCCG TAGGTCTCAT GCAGATCATG
CCCGCCACAG CCGAAGCGAT GTCGAAAGGG GATTCGAAGC GCCTGACCAC CCCGGAGCTG
AACATAAGGC TCGGGACCAG GCACCTTAAA GACCTGCTGG ATAGCTACGA CCGCAACTTA
ACCCTCGCTA TCGCCGCCTA CAACGCAGGG TCCGGCAACG TGAAACGGTG GCAGAAAGGG
TACGGGCATC TGCCCCAGGA CGAATTCGTG GAGAGCATCC CCTTCAAGGA GACGCGCGAG
TACGTGAAGA AAGTGGTGAC GGGCATGGAG ATGTACCAGC GTTTGTACCG CCTTCCCCCT
TACCAGCAGC CGAACCTGCA GAAGAAGGTG AACCCTGCAA GTGGGCATCC CGGCGAGCAG
AAAGTAGCGC AGGCGATTTC GGGACATTAG
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| Protein sequence | MFNRTAIAAA AVLFCTALPA SALTFKPADE ALASAASRMQ AKDYRTAKEA ASKVNDKGVR
SFMVGMAAAR LEQWEEAAAQ LPAAAEGYPI LADYALYYQG LSLAKLERHD QALTPLYRLL
KHYPESRLVR AALILYADTL AAAGHYNEAQ QSYATFVERY PSGSDSISAL YGSALCKEKL
GDPIAAAKVL RGIYLNYPAS SFSDKSARDL QRLTGAGTKV DPYTSAELFK RCGTLYGLGR
YLQAAEAYAE IPLSGESADF VAKLKLKKGQ ALYKARHYQQ AQATFSNISG ARHESDLWLA
RTLDKTGEQD QAFKLYMQLA QDRDSGNAGQ EALLEAAYLK RFQRKWSEAL PLFKQYLTAV
QQKPSNVLWE SAWASYQSRN YEDAAAQFKK LTEREDLRDK SLYWLGKTLA ATGDAKGAQQ
ALSTLAAEFP LGYYALISNN HAGEELPLPP KSITEALPMP SGFEREKALI SLGFYDEAVR
ELSIGKKNRS AAGIARLYLE MENFNGAFHA MSNEKPKRGD KDNATIWGVA YPLAYKEDVA
RHAAANAIPE SLVYAVMRQE SNYFPAALSP VGAVGLMQIM PATAEAMSKG DSKRLTTPEL
NIRLGTRHLK DLLDSYDRNL TLAIAAYNAG SGNVKRWQKG YGHLPQDEFV ESIPFKETRE
YVKKVVTGME MYQRLYRLPP YQQPNLQKKV NPASGHPGEQ KVAQAISGH
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