| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2599 |
|---|
| Symbol | |
|---|
| ID | 6782596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3010959 |
|---|
| End bp | 3011930 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768594 |
|---|
| Product | riboflavin biosynthesis protein RibF |
|---|
| Protein accession | YP_002139403 |
|---|
| Protein GI | 197118976 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTT TCAGAAGCAT CTCCGACATA AAGGAAAAAC TGCGCCACCC GGCGGTCACC
ATCGGCAACT TCGACGGAGT TCATCTGGGG CACCGCGAGA TCTTCCGGAG GGTGCGCGAA
CGGGCTGCAG AACTTTCCGG GGTCTCGGTG GTGGTGACCT TCGTGCCGCA CCCGCTGAAG
GTGCTCGGCG CCCACAAGGG GATCCGGCTC ATCACCACAC GCCGCGAGAA GGAGTTCCTC
ATCGAGTCAG CCGGGATCGA CTACCTCTTG GAGATCCCCT TCGACCGGGA GTTCGCCGCG
GTTCCCGCCG CCGATTTCGT GCAAAAGGTG CTGGTGGACG CCATCGGGGT CGAAAGCCTC
GTCATCGGCT ACGATTACGC CTTTGGCCGC GGCAGGGAAG GGAACGTGCA GTTGCTGCGC
GGGATGGGCG AGCGTTACGG CTACAGCGTC GAGGTGCTGG ACCCCATCTC CAACGGCGCC
ACGGTCTACA GCTCAACCAA GGTCCGCGAC ATGGTGAGCA AGGGCGACGT GGAAGGGGTG
GTCGGCGTCC TGGGGCGGCA TTACGCCATC ACCGGCACCG TGGTGCACGG CCACCAGCGC
GGCCGGGGGC TAGGCTTTCC CACCGCGAAC CTCGCCATGG AGAAGGACCT CCTTCCGGCG
GCGGGAGTCT ACGCGGTCAA GGTCTGCATC GGCAGCGACC TTTTGGATGG CGCCTGCAAC
ATAGGAACGA ACCCCACCTT CGGCAACGGG GCGCTTTCGC TGGAGGTATT CCTCTTCGAC
CTCGACCGCG ACCTCTACGG TCTGGAGGTC ACCGTGTTCT TCATCGAGAG GCTCAGGGAG
GAGCGCCGTT TCGACGACCT TCAGGCGCTC AAGGAACAGA TCGCGCTGGA CGTTTCGCGC
TGCCGGGGCA TCTTGCATGA TGCAGAACCG GTCGGGGCCG GCGACTGGGG CCCCCTTAAG
TGCTGCAAGT AA
|
|---|
| Protein sequence | MVIFRSISDI KEKLRHPAVT IGNFDGVHLG HREIFRRVRE RAAELSGVSV VVTFVPHPLK
VLGAHKGIRL ITTRREKEFL IESAGIDYLL EIPFDREFAA VPAADFVQKV LVDAIGVESL
VIGYDYAFGR GREGNVQLLR GMGERYGYSV EVLDPISNGA TVYSSTKVRD MVSKGDVEGV
VGVLGRHYAI TGTVVHGHQR GRGLGFPTAN LAMEKDLLPA AGVYAVKVCI GSDLLDGACN
IGTNPTFGNG ALSLEVFLFD LDRDLYGLEV TVFFIERLRE ERRFDDLQAL KEQIALDVSR
CRGILHDAEP VGAGDWGPLK CCK
|
|---|
| |