| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2595 |
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| Symbol | |
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| ID | 6782592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3005418 |
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| End bp | 3007124 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642768590 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_002139399 |
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| Protein GI | 197118972 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTAA GCAGACTGGG TGAGCTGCTG GTCAGCAACA GCCTCATAAC CAAGGAGCAG
TTGAAGCAAG CTCTGGCCGA ACAGAAAGCG GCCGGAGGCC AACTGCGTCT GGGCTCGATA
CTGGTCAGGG AGAACCTGAT CAGCGAGGCC GACCTCACCT CCTTCCTATC CAAGCAATAT
GGCGTGCCCA CCATAAACCT CGCGGACTAC GAGGTTGAGC CCTCGGTGGT TAAGATCATT
CCCGCCGAGA TCGCTCACAA ATACCAGATC GTACCTGTCA ACCGGGCCGG CTCCACGCTG
ATCATAGCGA TGAGCGACCC GTCCAACATC TTCGCCATCG ACGACATCAA GTTCATGACC
GGATACAACG TCGAGGTGGT GGTGGTGGCC GAGAGCTCCA TCAAGGCCGC CATCGACAAG
CTCTACGACC AGTCCGCGTC CTTAGCCGAT GTGATGAACG ACCTGGAGAT CGACGACCTC
GAGGTGGTGG GGGACGACGA GGAGGTGGAC GTAGGCTCCC TGGAGCGCGC CACCGAGGAC
GCCCCGGTCG TCAAGCTGGT GAACCTGATC CTCACCGACG CCATCAAGAA GAAAGCTTCC
GATATCCATA TCGAGCCCTA CGAGAAGTAC TTCCGGGTCC GTTACCGCAT CGACGGCGTG
CTCTACGAGG TGATGAAGCC CCCCTTGAAG CTGAAAAACG CCATCACCTC CCGCATCAAG
ATCATGAGCG AGCTGGACAT CGCCGAAAGG CGACTCCCGC AGGACGGCCG CATCAAGATC
AAGCTGGGGG GCGGCAAGGA CATGGACTTC CGCGTCTCGG TGCTCCCCAC CTTGTTCGGC
GAGAAGATCG TTCTGCGTCT TCTGGACAAA TCGAACCTGC AGCTCGACAT GTCGAAGCTG
GGCTACGAGC ATGAAGCGCT GGCGCACTTC CAGCGCGAGA TCCACAAGCC GTTCGGCATG
GTGCTGGTCA CAGGCCCTAC CGGCAGCGGC AAGACGGTTT CCCTCTACTC GGCCCTCTCC
GAGTTGAACA AGGTCACCGA GAACATCTCC ACCGCCGAGG ACCCGGTCGA GTTCAACTTC
GCCGGCATCA ATCAGGTGCA GATGCACGAG GACATAGGGC TCAACTTCGC GGCAGCCCTG
CGCGCCTTCC TGCGGCAGGA CCCCGACGTC ATCATGATCG GCGAGATCCG CGATTTCGAG
ACCGCGGAGA TCGGCGTGAA AGCAGCGCTC ACCGGCCACC TGGTGCTCTC CACGCTGCAC
ACGAACGACG CCCCCTCGAC CATCAACCGC CTGCTCAACA TGGGGATCGA GCCGTTCCTC
GTCGCCTCGG CCGTCAACCT CATCTCGGCG CAAAGGCTCG CGCGCCGGGT CTGCAGCGAA
TGCAAGCAGG TGGAGGAGGT ACCCCCCCAG GCGCTTATCG ACGCGGGGCT TCCCCGCGAG
CTGGCCGAAT CCGCCGTCTG CTACAGGGGG GCCGGCTGTC CCAAGTGCAA CGGGACCGGG
TACAAGGGGA GGGTCGGCTT CTATCAGGTC ATGCCGATGC TGGAGCCGAT TCGCGAGCTG
ATACTGAACG GGGCCAACAC GGCCGAGATC AAAAGGGAAT CGATGCGGCT GGGCATCAAG
ACGATGCGCC AGTCCGGTCT TACCAAGCTG GTGGAGGGGG TCACCTCCTT CGAGGAAGTG
CTGAGGGTGA CGGTTGCGGA CGACTAA
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| Protein sequence | MHVSRLGELL VSNSLITKEQ LKQALAEQKA AGGQLRLGSI LVRENLISEA DLTSFLSKQY
GVPTINLADY EVEPSVVKII PAEIAHKYQI VPVNRAGSTL IIAMSDPSNI FAIDDIKFMT
GYNVEVVVVA ESSIKAAIDK LYDQSASLAD VMNDLEIDDL EVVGDDEEVD VGSLERATED
APVVKLVNLI LTDAIKKKAS DIHIEPYEKY FRVRYRIDGV LYEVMKPPLK LKNAITSRIK
IMSELDIAER RLPQDGRIKI KLGGGKDMDF RVSVLPTLFG EKIVLRLLDK SNLQLDMSKL
GYEHEALAHF QREIHKPFGM VLVTGPTGSG KTVSLYSALS ELNKVTENIS TAEDPVEFNF
AGINQVQMHE DIGLNFAAAL RAFLRQDPDV IMIGEIRDFE TAEIGVKAAL TGHLVLSTLH
TNDAPSTINR LLNMGIEPFL VASAVNLISA QRLARRVCSE CKQVEEVPPQ ALIDAGLPRE
LAESAVCYRG AGCPKCNGTG YKGRVGFYQV MPMLEPIREL ILNGANTAEI KRESMRLGIK
TMRQSGLTKL VEGVTSFEEV LRVTVADD
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