Gene Gbem_2542 details

Gene Information

• Locus tag: Gbem_2542
• ID: 6782539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 2945998
• End bp: 2946438
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642768537
• Product: thioesterase superfamily protein
• Protein accession: YP_002139346
• Protein GI: 197118919
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAACT ATGACGACGA CATGGTTATC AATCACCCGC AGTTTCAGCT TCCCAAATGG 
ATCGCCTGTG CGCCGTTCGA AGAGTATCTC GGCATGCAGA TAGAGGAAGC AAAGGACGGG 
CGCGCGCTTC TGACTATGCC CTTCAAACTG AAGCTCGCCC AGGGAAAGGG GCTCATGCAC 
GGAGGAGCGG TTACCGCGCT GGCAGATACC GCTGTTGCCA TGGCGATAAA GAGTATGGTG 
CCGGAGGGAA CCGACTTCGT CACCGTGGAG ATGAGCCTGA AATTTCTGGT GGCGGTGCGC 
GAAGGCGTGG TGCGCGCTGA AGCGAGGGCC ATCCGGCAAA GCGAAAGAAA GATCGCGGGT 
GAGGCCGACC TTTTCAACGG CGAGACCAAG ATCGCGGAAT TCCGGGCGTT GTTCATAGTG 
ATGAAACCAA TTGACGGATG A 

 

Protein sequence

MYNYDDDMVI NHPQFQLPKW IACAPFEEYL GMQIEEAKDG RALLTMPFKL KLAQGKGLMH 
GGAVTALADT AVAMAIKSMV PEGTDFVTVE MSLKFLVAVR EGVVRAEARA IRQSERKIAG 
EADLFNGETK IAEFRALFIV MKPIDG