Gene Gbem_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2529 
Symbol 
ID6782526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2931833 
End bp2932465 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content53% 
IMG OID642768524 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_002139333 
Protein GI197118906 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.945859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAC TACTCTACGT TACCTGCAAC CTTAAACCTC TGGAGATTTC CCGGAGCCTC 
TCGGTCGGGA ACGAATTCCT GCATGAATAC CTCAAACAAA ATCCTGACGA CGAGGTGCAT
TTTCTCGACC TTTACCGCGA CCACATCCAG CGGATCGATG CCGATGTTCT CTCCGGCTGG
GGGAAACTGC GGAGTGGCGC GAGCCTTGCG ACCCTCTCCG ACGACGAGCA GCGCAAAGTC
AGCCGCATCT GGAAGCACGC AGACCAATTC ATCGCAGCGG ACAAGTACGT GTTCGTGACA
CCGATGTACA ATCTCGGCTT TCCGGCGGAA TTCAAGATGT ATATAGATGC GGTATGCGTG
GTCGGCAAAA CTTTCACATA CACCCCTGCC GGCGCTGTCG GTCTTTTGAA AAACCAGGGC
AGAAAGTGTC TCCATATTCA CTCGAATGGC GGCTTCCATT ACGGCAAGGA AGAGGACCAC
TCCGTCCCTT ATCTCAAATC AATTATGGGC TTCATGGGGA TCGAAGACTT TGAATCGGTC
GTCTTGGAGG GGGTCGACGC CATGCCGGAC TTGGCAGAAG AATTCAAACA AGCAGCCGTA
ATAAAGGCCC ATCTAGCCGC GCAGAGCTTT TAA
 
Protein sequence
MARLLYVTCN LKPLEISRSL SVGNEFLHEY LKQNPDDEVH FLDLYRDHIQ RIDADVLSGW 
GKLRSGASLA TLSDDEQRKV SRIWKHADQF IAADKYVFVT PMYNLGFPAE FKMYIDAVCV
VGKTFTYTPA GAVGLLKNQG RKCLHIHSNG GFHYGKEEDH SVPYLKSIMG FMGIEDFESV
VLEGVDAMPD LAEEFKQAAV IKAHLAAQSF