| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2419 |
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| Symbol | |
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| ID | 6782417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2805118 |
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| End bp | 2808189 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768416 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002139225 |
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| Protein GI | 197118798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG CACCATCGCA GAGAAACAAC AGGCAATCCG GCAGGAACCT GGTGGTCTGG
ACCGCCTCGG TGGTCCTGCT GATAAACCTG TTCCTGGCGC TAACGGGTTT CTTCTCCCTC
TGGCAGAGTA GGGAAACTTA CCTCGGCAAC GCACAGGTAC AAAGCGACAA CCTCTTGCAG
GCGCTTTCCT ACAGCATCGC AGGGGTACTG GAGTCTGCTG ATATCGCGCT TTTGTCCATG
GTGGATGAAG TGCAGCAGGA GCTGCAGCAG GGACGAGTCG AGGAAGGGGA GCTGAACAGT
TTGCTGGCGG GGCAGCGTTC CCGGCTGCCG ATGCTGGACA GCATGCGGAT CGCCGATGCC
CAGGGAAATA TCCGCTACGG CACCGGGGTG CAGGCGGGCA CCTTGAAAAA CGTCTCGCAG
AGAAGCTACT TCAAGAAACT GGCCACCGAT CCGAGGGCGG GGCTGGTGAT TTCGGAACCG
ATCCTAGGGC TAATCAGCGG CAAAAGGGTC CTTATCCTCG CCCGAAGGGT GGAGCGATCT
GGCGGCGCTT TTGCCGGCGT GGTGTACTGT GCCATCGATT TGGAGCGTAT CCGCGGCATG
CTCCTGCCGA TGAAGGTGGG CTCCCACGGC ACAATTACTC TCACCGACGC GTCGCTGTCC
GCCATCGTGC GGCATCCGCA GGGTACGGAT GCCGGCGCCG TAACGGGGCG AAAGGGGGTG
CCGGGCGAGA TCTGGGACCA AATCGCCCGG GGGCGCGAGA GCGGGAGCTA CTTTGGCGAA
AGCGATGCTT GGGGCTCCCC CAGGCTCGCA TCCTTCCGCA AGGTCGGCCG GTTTCCCCTG
TACCTCTCCC TGGAGCTGGC GCCTGAAGAC TTCCTGGCCC GCTGGCGCGG CGAGCTGCTC
CAGATCAGCA CCATGGTCTG CGTATTCCTC CTGGTCACCC TGATCCTTTC CAGGATCATC
TACTTGAGGT GCCTTCGGCA GGCAGCGGCG GAAGACGAGC TGACTCAGGC CAAGGAGGAA
CTGGAGCTGC GGGTGGCTGA GCGGACGGCC GAGCTGCATC TTGCCAACCT GAAGCTTACG
ACCGAGCTAG CCGAGCGAGA GCGGGCTGAG AAGAGGGAGC GCGAAGGGCG CAACATGCTG
GCACAGATCA TCGACACCAT CCCGCAGTCC GTGTTCTGGA AGGACCGGGA GAGCATCTAC
CAGGGATGCA ACGCCGTCTT TGCCAAGGGG GCCGGGGTGG CACACACCGA CGAGATCAGG
GGCAAGAGCG ACTTCGACCT TCCCTGGCTG CGCGAGGAGA GCGAGGCGTA CCGCAGCGAC
GACCGCGCGG TCATGGGGCA AAACCGCGCC AAGTTCCACA TCATCGAGCA GCAGCTGCAG
GCGGGTGGGA GGCGTATATG GGTGGATACC ACCAAGGTGC CGCTTCTGAA CGAGCAGGGA
GAGGTGGCCG GGATACTGGG AGTGTACGAG GACATTTCCG AGCGAAAGGC GGTCGAGGAG
TCGCGCGACA AAGCGCTGGC ACTGGTGGAG TCCCTCTTAG CCGCATCGCC CACCGGCATC
CTGGTCTACG AGGGGGCAAG CGGCTGCTGC GTCATGGCGA ACCAGGCGAT GGCCGCGATG
GTGGGGGGGA CCCGGCAGCA GATACTGACC TTGAACTTCA GGGAGATTGA GCTCTGGCGG
GAGGCGGGGA TTCTCCAGCT TGCCGAGCAG GTCCTCTCCG ACGGGCGGAC ACGGAGCATC
GAAGTCTGCG CGCAAACGAG CTTCGAAAAG AGCATCCAGG CCGAGTTCCT CCTCTCGCGC
TTCGAGGTGG AGGGGCGTTC GCACCTCATG TTCATCGCGG TCGACATAGC GGCGCGAAAG
GGGCTGGAGG AGGAGAAGCG GCAGATCCAG GCCCAGATGC TACACGTGCA GAAGCTGGAG
AGCCTGGGGG TTTTGGCCGG CGGCATAGCC CATGACTTCA ACAACATCCT GATGGTGGTG
TTGGGCAACG CCGACCTTGC CTTGATGCGA CTTCCCGAAG GGACCCCGGT GCGGGAAAAC
CTGCAGCAGA TCGAACAGGC CGCGAGCAGG GCCGCGGACT TGGCTCAGCA GATGCTGGCC
TACTCCGGGA GAGGGAATTT CGTGATCCAG AAGCTGGATC TGGCCCAGAC GGTCAAGGAG
ATGGCTCAGA TGCTCGAGAT CTCCATCTCC AAGAAGACGC AGTTGCATTA CGATTTCGCC
CCCGACCTCC CGGCCATCAG CGGCGACGCC ACGCAACTGC GCCAGGTGAT CCTGAACCTG
GTGTTGAATG CCTCCGAGGC GATAGGCGAC AACATCGGCG TGATAGCGAT CAGGACCGGC
TACCTGGAGT GCGACCGCGC CTACCTCTCC GAAACGTGGA TCGATGACCG CCTCCCCGAG
GGCCCCTACC TGATGCTGGA GATCTCCGAC AACGGCTGCG GCATCAAGAA AGAGATCATC
CCCAAGATCT TCGATCCGTT CTTCACCACC AAGTTCACCG GCCGCGGGCT CGGCATGGCC
GCGGTGCTAG GCATCGTGCG CTCGCACAAC GGCGCCATCA AGATCTACAG CGAGGAAGGG
AAGGGGAGCA CCTTCAGGCT GCTGCTCCCG TGCATGTCTG CGCAGGGAGA GGCCCTGCAA
CCGGCGGCGG AGGAGGGTCT TTGGCGCGGC AGCGGCACGG TGCTTTTGGC CGACGACGAG
GAATCGATCA GGGCCCTGGG GCAGGAGATG CTGGAGACGC TAGGATTCCG GGTGCTGACG
GCCTGCGACG GGCGCGCGGC GGTCGAACTC TTCAAGGAAA AACGGGAGGA GATCGTCTGC
GTGGTCCTGG ACCTTACCAT GCCGGAGTTG GACGGCGAGC AGGCCTTTAC CGTACTGCGC
GAAATGGAGC CGGGGGTGAG GGTGATCCTT TCCAGCGGTT ACAATGAGCT GGAGGTGAGT
CGGAAGTTCG AAGGCTGCGG GGTTTCCGGG GTAATGCAGA AGCCGTACAA ACTGGCGGAG
ATGAGCAGGA AGCTGCGACA GATACTGGAG CCGGAGGAGG GCTCACAGGA GGCGGCAGAG
CTGGGCGGCT AG
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| Protein sequence | MNAAPSQRNN RQSGRNLVVW TASVVLLINL FLALTGFFSL WQSRETYLGN AQVQSDNLLQ
ALSYSIAGVL ESADIALLSM VDEVQQELQQ GRVEEGELNS LLAGQRSRLP MLDSMRIADA
QGNIRYGTGV QAGTLKNVSQ RSYFKKLATD PRAGLVISEP ILGLISGKRV LILARRVERS
GGAFAGVVYC AIDLERIRGM LLPMKVGSHG TITLTDASLS AIVRHPQGTD AGAVTGRKGV
PGEIWDQIAR GRESGSYFGE SDAWGSPRLA SFRKVGRFPL YLSLELAPED FLARWRGELL
QISTMVCVFL LVTLILSRII YLRCLRQAAA EDELTQAKEE LELRVAERTA ELHLANLKLT
TELAERERAE KREREGRNML AQIIDTIPQS VFWKDRESIY QGCNAVFAKG AGVAHTDEIR
GKSDFDLPWL REESEAYRSD DRAVMGQNRA KFHIIEQQLQ AGGRRIWVDT TKVPLLNEQG
EVAGILGVYE DISERKAVEE SRDKALALVE SLLAASPTGI LVYEGASGCC VMANQAMAAM
VGGTRQQILT LNFREIELWR EAGILQLAEQ VLSDGRTRSI EVCAQTSFEK SIQAEFLLSR
FEVEGRSHLM FIAVDIAARK GLEEEKRQIQ AQMLHVQKLE SLGVLAGGIA HDFNNILMVV
LGNADLALMR LPEGTPVREN LQQIEQAASR AADLAQQMLA YSGRGNFVIQ KLDLAQTVKE
MAQMLEISIS KKTQLHYDFA PDLPAISGDA TQLRQVILNL VLNASEAIGD NIGVIAIRTG
YLECDRAYLS ETWIDDRLPE GPYLMLEISD NGCGIKKEII PKIFDPFFTT KFTGRGLGMA
AVLGIVRSHN GAIKIYSEEG KGSTFRLLLP CMSAQGEALQ PAAEEGLWRG SGTVLLADDE
ESIRALGQEM LETLGFRVLT ACDGRAAVEL FKEKREEIVC VVLDLTMPEL DGEQAFTVLR
EMEPGVRVIL SSGYNELEVS RKFEGCGVSG VMQKPYKLAE MSRKLRQILE PEEGSQEAAE
LGG
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