| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2411 |
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| Symbol | |
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| ID | 6782409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2791465 |
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| End bp | 2794479 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768408 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002139217 |
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| Protein GI | 197118790 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0350749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA GCGAACTGAA CAATCGAGTT GTGGCAAGGG GCAAGGAGTT TTTCTCGACC
ATCTCCGGCG AGAAGCCGTC TCTCTTTAAT AAGGGCGCCT GGATGGGCAA GGTCATGGAT
TGGAGCATGC AGAACGAGAC CTTTAAGATC CAGATGTTCC GCTTCGTCGA CGTCTTCCCG
TCTCTCACCA CCGGGAAACT GCTGACGGAC CACATCCGCG AATACTTCGG CGAGGAGAAG
GATATGCCTC CGGTTCTCTC CACCGGCGCC AAGGTGGCGG GCATGCTCGG CTCCTTCGGC
GGTGCGGTCC TCAACAAGTT CCTCACCACC AACATTCAGG AGATGGCCCG TCAGTTCATA
GTCGGGGAGA ACACGAAGGA AGCGATCAAG AACATGGAGC GCCTGAGAAA GGACGGCTTC
GCCTTCGTCG TGGACGTGCT GGGCGAGGCG ACGCTTTCGG AGAAGGAAGC GGATATCTAC
ATGAACACCT ACCTGGAGCT TCTGGACTCG CTCAAGAAGG AATATAAGGA CTGGAAACCG
CTGCCGGGCA GGGGAGGGGA GGCCGGCCTC GATTGGGGTC ACGCTCCAAA GGTGAACGTT
GCGGTCAAAC CGACGGCGCT TTTCTGCCTC GCCAACCCGC AGGACTTCGA GGGCTCGGTG
GTCGCCATTC TGGAGCGCGT GCGCAAGATC GCGGTGAAGG TCATGGAGCT GAACGGCTTC
CTCTGCATTG ACATGGAGTC TTACCGCCAC AAGGACATCA TCATCGAAGT CTACAAAAGG
CTGAAGCTCG AGTACCCGGC ATACCCCCAT TTCGGCCTCG TGCTCCAGGC ATACCTGGTG
GACACCGACA AGGACCTTCC CGAACTCCTC GCCTGGGCGC GCCAGAACAA GGTGCAGATC
TCGATTCGCC TGGTGAAGGG GGCGTACTGG GACTATGAAA CCGTGAAGGC CAAGCAGAAC
GACTGGAAGG TTCCGGTCTG GACCATCAAG GCGGAGTCGG ATGCGGCTTA CGAGCGACAG
GCCAGGATGA TCCTGGAAAG CTCCGACATC TGCCACTTCG CCTGCGCCTC GCACAACATC
AGGACCATCT CGGCGGTTAT GGAGATGGCC AAAGAGCTGA ACGTGCCGGA CGAGCGCTAC
GAGTTCCAGG TGCTTTACGG GATGGCGGAG CCGGTCCGCA AGGGGATACT GAAGGTTGCC
GGCCGCATCC GCCTCTACTG CCCGTATGGC GACATGGTCC CCGGCATGGG GTACCTGGTC
CGGCGTCTGC TGGAGAACAC GGCAAACGAG TCCTTCCTGC GTCAGAGCTT CGCCGAGGAC
GCGCAGATCG AGAAACTCCT GGAGGACCCG GAGGTGACCG CCGAGCGTGA GCGTAAAGCG
CGCGCCGCGA AGCACAAGGC TATAGCGAAA GGCCCCGGCA ACCTGGCGCC ATTCAACAAC
GAGGCGATGG TGGACTTCAC CAGGGCCGAC CATCGCGCTG CGTTCCCGAA ACAGATAGCG
GAGGTGAGGA AGCAGTTGGG CAAAACCTAC CCGCTCTTCG TCAACGGGAA GGAAGTGAAG
ACCGGCGACA CCATCGCCTC GGTCAACCCG AACAACCCTT CGGAAACGGT CGGCATCGTC
TGCCAGGCGG GGACCAAGGA AGTGGGCGAT GCAATCGCCG CCGCCAAGGG TGCTTTCCCG
GCATGGCGCG ACACCGACAT CAAGCTCCGC GCCGAGTACC TCGTCAAGGC TGCCGCCGCG
GCGCGCCGCA GGATCTTCGA ACTCTCCGCA TGGCAGGTGC TGGAGATAGG CAAGCAGTGG
GACCAGGCCT ACGCCGACGT CTGCGAGGCG ATCGACTTCC TCGAGTACTA CGCCCGCGAG
ATGATTGCCT TGGGCGCCCC CAAGCGCATC GGCCACGCGC CGGGCGAATT GAACCACTAC
TTCTACGAGC CCAAAGGGGT GGCCGCGGTA ATCTCTCCGT GGAACTTCCC GCTGGCGATC
AGCATGGGCA TGGTTTCGGC GGCGATCGTT GCCGGCAACT GCGTGGTCTT CAAACCCTCC
GGCCTTACCT CGGTCATCGG CTACCACATC GTGGAACTCT TCCGCGAGGT AGGCCTTCCC
GACGGCGTCT TCAACTACAC CCCCGGCCGC GGCTCGGTGA TGGGGGATTA CCTGGTCGAC
AGCCCTGACA TCAGCCTGAT CGCCTTCACC GGATCGATGG AAGTCGGTCT GCGCATAATC
GAGCGCGCCG CCAAGGTGTA TCCTGGGCAG GAGAACGTGA AGAAGATCGT CTGCGAGATG
GGAGGCAAGA ACGCCATCAT CATCGACGAT GACGCCGACC TGGACGAGGC GGTGCCGCAC
GTGCTCTACT CCGCCTTCGG CTTCCAAGGG CAGAAGTGCT CCGCATGCTC CCGCGTCATT
GTCCTCGACG CGGTCTATGA CAAGTTCGTG GAGCGCCTGG TCTCCATGGC CCAGGCGACG
CTTGTCGGCC CCTCTGAGGA CCCGGCCCAC TATATGGGTG CCGTAGCCGA CGACAAGGCG
ATGAAGACCA TCAAGGAATA CGCGGAGATC GGCAAGAAGG AGGGTCAGCT CCTTTACGAG
AGCAAGGTCC CGGCCGACGG CGGCTATTAC GTCCCGATGA CCATCATCGG CGGCATCAAG
CCCGAGCACA GGATCGCGCA GGAAGAGATC TTCGGACCGG TCCTGGCCGT CATGCGCGCC
AAGGACTTCG ACCAGGCCAT CGCCTGGGCC AACTCCACCA AGTTCGCACT GACCGGCGGC
GTCTTCTCCA GAAGCCCCGA ACATCTGGCG CAGGCTCGCA AGGAATTCCG GGTCGGCAAC
CTGTACTTAA ACCGCAACAA CACCGGCGCC CTCGTCGGCC GCCAGCCCTT CGGCGGCTCC
AAGATGTCCG GCGTCGGCAC CAAGGCTGGC GGACATGACT ACCTGCTGCA CTTCATGGAC
CCCAGGGTCG TCACCGAGAA CACCATGCGC CGCGGCTTCG CACCGGTCGA GGAGGACGAC
GACTGGGTCG CATAA
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| Protein sequence | MNNSELNNRV VARGKEFFST ISGEKPSLFN KGAWMGKVMD WSMQNETFKI QMFRFVDVFP
SLTTGKLLTD HIREYFGEEK DMPPVLSTGA KVAGMLGSFG GAVLNKFLTT NIQEMARQFI
VGENTKEAIK NMERLRKDGF AFVVDVLGEA TLSEKEADIY MNTYLELLDS LKKEYKDWKP
LPGRGGEAGL DWGHAPKVNV AVKPTALFCL ANPQDFEGSV VAILERVRKI AVKVMELNGF
LCIDMESYRH KDIIIEVYKR LKLEYPAYPH FGLVLQAYLV DTDKDLPELL AWARQNKVQI
SIRLVKGAYW DYETVKAKQN DWKVPVWTIK AESDAAYERQ ARMILESSDI CHFACASHNI
RTISAVMEMA KELNVPDERY EFQVLYGMAE PVRKGILKVA GRIRLYCPYG DMVPGMGYLV
RRLLENTANE SFLRQSFAED AQIEKLLEDP EVTAERERKA RAAKHKAIAK GPGNLAPFNN
EAMVDFTRAD HRAAFPKQIA EVRKQLGKTY PLFVNGKEVK TGDTIASVNP NNPSETVGIV
CQAGTKEVGD AIAAAKGAFP AWRDTDIKLR AEYLVKAAAA ARRRIFELSA WQVLEIGKQW
DQAYADVCEA IDFLEYYARE MIALGAPKRI GHAPGELNHY FYEPKGVAAV ISPWNFPLAI
SMGMVSAAIV AGNCVVFKPS GLTSVIGYHI VELFREVGLP DGVFNYTPGR GSVMGDYLVD
SPDISLIAFT GSMEVGLRII ERAAKVYPGQ ENVKKIVCEM GGKNAIIIDD DADLDEAVPH
VLYSAFGFQG QKCSACSRVI VLDAVYDKFV ERLVSMAQAT LVGPSEDPAH YMGAVADDKA
MKTIKEYAEI GKKEGQLLYE SKVPADGGYY VPMTIIGGIK PEHRIAQEEI FGPVLAVMRA
KDFDQAIAWA NSTKFALTGG VFSRSPEHLA QARKEFRVGN LYLNRNNTGA LVGRQPFGGS
KMSGVGTKAG GHDYLLHFMD PRVVTENTMR RGFAPVEEDD DWVA
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