Gene Gbem_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2398 
Symbol 
ID6782396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2777921 
End bp2778955 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content65% 
IMG OID642768395 
Productlysine 2,3-aminomutase YodO family protein 
Protein accessionYP_002139204 
Protein GI197118777 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.723604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGT GGGAGAAAAG CCTGAAAAAC TGCATCACCA GCCCGGAGGA GCTTTCCGGG 
CTTTTTCGTC TGCAGGGGGG CGCGTTTTCG CCGGTGGTCG AGCGCTACCC CATGCGGATC
ACGCCCTACT ACCTCGGACT GATCGAGGAG CCGGGCGATC CCATCTGGCG CCAGTGCGTC
CCCGACCCTG CAGAGCTTGA CGACCTGACC CAGTCCCCCG ATCCCCTGGA CGAGGAGCGG
CTTTCCCCGG TCCCCGGGTT GATCCACCGC TACCCGGACC GGGTCGTCTG GATCGTCTCC
TCTGCCTGCG CCGTCTACTG CCGCTTCTGC ATGAGGAAAA GAGGGGTGGG GTGCGCCAGC
ATGGCGCCGG CCAAGGTTGA CGACGCCATC GCTTACATTG CCGGCGACCC GCGGATCCGC
GACGTCGTCC TCTCCGGCGG CGATCCGCTG CTCTTGCCGG ATGACCGTCT CGCCGCGATA
CTCTCAGCGC TTTCCCGCAT ACCGCACGTC GAGATCGTGA GGATCGGGAC GCGGGCCCCG
GTGACCCTTC CGGAAAGGAT CACCCCCGGG CTCACGCGCC TTTTGAAGCG CAGCCATCCT
GTCTACGTCA ACACCCACTT CAACCATCCC CGGGAGATAA CCCCGCAATC GGCCAAGGCC
TGTGCCAGGC TCGCCGATGC CGGGGTGCAG CTGGGGAACC AGACCGTGCT CCTCAAGGGG
GTGAACGACG ACCCCCAGAC GATGCTGAGC CTGATGCGGC GTCTGCTCGC CATCCGGGTG
CGTCCTTACT ACATACATCA AATGGACCTG GTACAGGGGA CCGCCCACTT CAGGACCCGC
GTGGGGCAGG GGATCTCCGT GATGCAGGCG CTGCGCGGCC ACACCTCCGG GCTTGCCGTT
CCGCATTACG TCATCGACCT CCCTGGCGGC AAAGGAAAGG TCGATGTCCT TTCCGGTCGC
CCTGGCAGTG GCGGCCGGAC TCTGCTTTTC ACCAACTACC TGGGAGAAGA GATCGAGTAC
CCAGAACCGG ATTAA
 
Protein sequence
MEAWEKSLKN CITSPEELSG LFRLQGGAFS PVVERYPMRI TPYYLGLIEE PGDPIWRQCV 
PDPAELDDLT QSPDPLDEER LSPVPGLIHR YPDRVVWIVS SACAVYCRFC MRKRGVGCAS
MAPAKVDDAI AYIAGDPRIR DVVLSGGDPL LLPDDRLAAI LSALSRIPHV EIVRIGTRAP
VTLPERITPG LTRLLKRSHP VYVNTHFNHP REITPQSAKA CARLADAGVQ LGNQTVLLKG
VNDDPQTMLS LMRRLLAIRV RPYYIHQMDL VQGTAHFRTR VGQGISVMQA LRGHTSGLAV
PHYVIDLPGG KGKVDVLSGR PGSGGRTLLF TNYLGEEIEY PEPD