Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2372 |
Symbol | |
ID | 6782371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2751128 |
End bp | 2752009 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768371 |
Product | UspA domain protein |
Protein accession | YP_002139180 |
Protein GI | 197118753 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.019406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTGGA AAATTCTTTT GGCCACCGAT CTGACTCCAG CATCCGACGA GCTCATTGAG TGCGCCCGGG CATTCAAAGA GATAGGGACG GAGGAAGTCG TCCTCGTCCA CGTTACCGAA GTAGTAGATG CCACCGGCGC GGTCGAGGTG CTGCCTGTGC AACCGGTCGA TGTTGACGCG GTGCTGGGGA GGCAGAGGGA TGCCTTGGAG ATGCTTGGGA TGAAGGTTGC GGTAGAGAGC CTATTGGGCC CGCCTGCCGC CATGCTGGAG CGGGCCGCGA AAGATCACGG CGTCAACGCC ATCCTCGCCG GATCCCACGG CAAGGGGCTC TTCCTCTCGG CTGCGCTCGG CAGCGTCTCA AGGGAGCTTT TGAGGACAAC CAGGCACCCC CTGCTTCTGG ACCGTCTGGA TCTCGGCAAA ACCGGGGAGG AGGGTGCTTC CTGCCGCAAG ATCTTCTCCC GCATACTTTT CCCCACCGAT TACTCGGAGA CAGCTGAGAA GGCGCTGGAT TTCCTGGGCA AGGTCGCACT GGAGACCGGT TGTTCCGTGA CGCTTATGCA CGTCATGGAA GCAAGGGACG AAGAGCCGGA AACGGAGCGC CGCCGCGAGG AGGAGTGCTG GTACCTGCTG GAGGCGAAAA AGCGTCGACT CGAAAGGCTG GGGGCGGCAG AGGTAAGCAT CGACCTCGTA CACGGCAGGG CTTCGGAGGA GATTCTCTCC AGCATGAACA AGGGGACCTT CACCGCCATA GTTATGGGCG GAAAGGGGAA GGGGATGCTG ACAGAACTGA TTCTGGGGAG TACCGCCAAT GAAGTAGCCC GACGTGCGAC GATTCCAATT CTCTTTGTGC CTGCGGCTGT GACAGAGGCT CCCAGCTCAT AG
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Protein sequence | MFWKILLATD LTPASDELIE CARAFKEIGT EEVVLVHVTE VVDATGAVEV LPVQPVDVDA VLGRQRDALE MLGMKVAVES LLGPPAAMLE RAAKDHGVNA ILAGSHGKGL FLSAALGSVS RELLRTTRHP LLLDRLDLGK TGEEGASCRK IFSRILFPTD YSETAEKALD FLGKVALETG CSVTLMHVME ARDEEPETER RREEECWYLL EAKKRRLERL GAAEVSIDLV HGRASEEILS SMNKGTFTAI VMGGKGKGML TELILGSTAN EVARRATIPI LFVPAAVTEA PSS
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