| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2338 |
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| Symbol | tpiA |
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| ID | 6782334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2714554 |
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| End bp | 2715309 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642768334 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_002139146 |
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| Protein GI | 197118719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000215074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCAAGC CGGTCATAGC AGGCAACTGG AAACTGTTCA AGACTAAGAA CGAGGCGCTC
GCACTGATAG AAGAATTGGC ACCGCTGGTT TCCGGCGTGG ACAGCGTGGA GATCGTGGTG
GCGCCGGTGT TCACCGTGCT CCCCACCCTC CCCGCTGCGC TCGCCGGCAC CGGCATAAGC
CTTGCCGCCC AGGACGTATT CTGGGAAGAA GAAGGCGCCT TTACCGGCGA AGTTTCGCCG
CGCATGCTTC TCGATGCCGG TGCAAGCCAC GTCATCATCG GCCATTCCGA ACGCCGGCAG
TATTTCGGCG AGACCGAGGA AACGGTCAAC AAGAAGGTGA AGGCCGCACT CAAAGGGGCG
CTTGTCCCCA TCGTGTGCAT CGGCGAAACC CTGGAAGCGC GCGAAGCTGG CGATACCTTC
AAGGTGCTGG AGCGCCAGCT GAAGGGTGGG CTCGAGGGGC TGACAGGGAC ACAGTTCGCG
CCGGTCATCG TAGCCTACGA GCCGGTCTGG GCCATCGGCA CCGGCAAGGT CGCCTCCGAC
GACCAGGCGC AGGAGGCACA TGCCTTCATT CGCGGGGTCA TCGCAGGACT CTTCGGCAAG
TCGGCGGCGG ATAAAGTGAG GATTCTCTAC GGCGGCTCCG TGAAGCCGGA TAACGTGAAA
GGACTCATGT CGCGCCCTGA CATAGACGGT GCGCTCGTGG GAGGCGCAAG TCTCAAAGGC
GCATCTTTTG CCTCAATCGT GCGTTACAGT GAATAA
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| Protein sequence | MRKPVIAGNW KLFKTKNEAL ALIEELAPLV SGVDSVEIVV APVFTVLPTL PAALAGTGIS
LAAQDVFWEE EGAFTGEVSP RMLLDAGASH VIIGHSERRQ YFGETEETVN KKVKAALKGA
LVPIVCIGET LEAREAGDTF KVLERQLKGG LEGLTGTQFA PVIVAYEPVW AIGTGKVASD
DQAQEAHAFI RGVIAGLFGK SAADKVRILY GGSVKPDNVK GLMSRPDIDG ALVGGASLKG
ASFASIVRYS E
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