| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2335 |
|---|
| Symbol | |
|---|
| ID | 6782331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2709706 |
|---|
| End bp | 2711790 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642768331 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139143 |
|---|
| Protein GI | 197118716 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.179708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA CCCTGGAAAA ACGCATCTTA CTGTTCTCTT TCCTGATCCT GTTCCTAGCG
ATTTCAATCG GTTCCGGAAT GGATATCATG GCGCTGCGTC GAGATCACGT CAACGCGCTC
AACCTTCGGT CCAAAGGCCT CGCCACCGCA CTCAAATCCA ATATCGAAAA AGTCCTCAAC
CTGGGTCTGG AACTGAAGGA TATGACCGGG GTCTCCGAGA AGTGCCGAGA GATCATCGAG
GGAAACCAGG ACATAGCCTA CTGTCTGGTT TCCGACCTCT CCGGCAAGGT TCTTTTTGCC
AGCGATCCCC GCTTCATGAA TTTTCCTGCG CGTCTGCTGC AATCCGACCA AAAGAAAGAA
GGAGACCGTC CGGAATCCGG AGTCTACAAG AACCGGATTT CCATGCCGGT CGACGGCGTA
GATACCTCCT TTTACGATTC CGCCGTCTCC GTCGTCGGCC CCTACGGCAA ACCGATCGCC
ATGGCGCACG TCGGCTTCAG CGAGCAGGTG GTCTCGGACA AGATGAAGGG AATGGTGTTG
AAGACCCTAT TCCTTTTGGC CGTCTCGCTC TTCACCTCCT TCTCGCTCAT CATGCTCTTC
ATGAAAAAGT ACGTGATGCA GCCCATCTCG ATGCTTCTCA AGGGGGTGAA ACAGATCTCC
GAAGGGGCTT TCGACACCCA CATCGGAGAG GTTGAGGTCT ACGAGTTCAA CGAGCTTGCC
CGCAACGTCA ACATCATGTC CCAGTTTCTC AAGAACAGGG ACGCCGAGAT CAAAAAGAAC
TACCAGGACA TGGAGCGGAC CTTCGAAGAG CTCCAGGCGT CCTACCGGAA GCTGGAGCGA
CTCTCCAACG ACCTTGAGCG TTCCGAGGAG CTTTACAAGT CGCTGATGGA AGACGCAAGC
GACGCTATCG TCGTCATCGG CGGCGACGAG TCCGTCCGCA TGGTCAACAA GATGGCGGAG
GAGTTCTTCG GCTACGAGGC GAAGGAGCTT TTGGGTCTGC CGCTCACCAA GATGCTGCTC
CTTTTGAACA TCAGCAACAT CCCCAAGGTG CACCGGATCT TCCGGGAGGC GGCGCAAGGT
GCGCACATAG CTGAGGAGAT GCAGCTCTGC AAGAAGCAAG GCGGCGCCAT GGTCGCCATG
CTGCACGCCT CCAGCATCAA GAGCGGTTCT GAGAACGTGG TGCAGGCGAT CTTCCGCGAC
GTGACCCGCG AGCGCGAGAT CATCCTGAAC CTGGAGAAGA GTTCCGCCGA CCTCGCGCGG
CTGAACCGCA TGAAGGATTC CTTCCTGGGC CTTGCCTCCC ACGAGCTGAA AACGCCGCTT
ACCGTCATCA TGGGGTACTC CGAGCTGATC ACCACCGACC TTGCCGACCG CATGGACAAG
ACCGTGCTGG AGATGGTGGT GAACATCGCC AACGCCGCCT CGCGCCTGGA CAACATCATC
AAGGACATGG TTGACGTTTC CATGATCGAC GAGAAGAGGC TGCAGCTGAA GGTGGAGGAC
ATCCAACTAA ACCGGCTCAT CGAAGCCTCG GTGAACGAGC TCCGCTTCTT CTTCTCGATG
AGGAAGCAGG AGGTGGTGGT AAACCTGGAC GAGTCGATCC CCACTATTCG CGGCGACGCG
CTGCGCCTCA TGCAGCTCCT CTCCAACATC CTCGGCAACG CCATCAAGTT CACCCCCGAC
GGCGGCAAGA TCACCGTCAG CACCTCGGCA AAATACCTTT TGCGCGGCAA GGGTGGTGCC
GAGGGGGGCG GGGAAGGGCA CGAGCACCAT CTTTTCCTGG AGATCACCGT CACCGACACC
GGCATCGGCA TAGACCGCGA GGACCAGCTG AGGGTTTTCG AAAAGTTCTA CGAGGTGGGG
AACATCCAGG AACATTCCAG CGGCAAAGTC GCCTTCAAGG CGAAGGGGGC GGGCCTCGGC
CTCTCCATCG CCAAGGGAAT CGTCGACATG CACGGCGGCG AGATCTGGGT GGAGTCCACC
GGGTACAACC CGGAGCGCTT CCCGGGATCC ACCTTCCATA TCCTGCTGCC GCTGGCGCCC
GGGCTCGGCG AGAACGCGAC CGACTACAGC AGACTTCTGC GTTAA
|
|---|
| Protein sequence | MKMTLEKRIL LFSFLILFLA ISIGSGMDIM ALRRDHVNAL NLRSKGLATA LKSNIEKVLN
LGLELKDMTG VSEKCREIIE GNQDIAYCLV SDLSGKVLFA SDPRFMNFPA RLLQSDQKKE
GDRPESGVYK NRISMPVDGV DTSFYDSAVS VVGPYGKPIA MAHVGFSEQV VSDKMKGMVL
KTLFLLAVSL FTSFSLIMLF MKKYVMQPIS MLLKGVKQIS EGAFDTHIGE VEVYEFNELA
RNVNIMSQFL KNRDAEIKKN YQDMERTFEE LQASYRKLER LSNDLERSEE LYKSLMEDAS
DAIVVIGGDE SVRMVNKMAE EFFGYEAKEL LGLPLTKMLL LLNISNIPKV HRIFREAAQG
AHIAEEMQLC KKQGGAMVAM LHASSIKSGS ENVVQAIFRD VTREREIILN LEKSSADLAR
LNRMKDSFLG LASHELKTPL TVIMGYSELI TTDLADRMDK TVLEMVVNIA NAASRLDNII
KDMVDVSMID EKRLQLKVED IQLNRLIEAS VNELRFFFSM RKQEVVVNLD ESIPTIRGDA
LRLMQLLSNI LGNAIKFTPD GGKITVSTSA KYLLRGKGGA EGGGEGHEHH LFLEITVTDT
GIGIDREDQL RVFEKFYEVG NIQEHSSGKV AFKAKGAGLG LSIAKGIVDM HGGEIWVEST
GYNPERFPGS TFHILLPLAP GLGENATDYS RLLR
|
|---|
| |