| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2308 |
|---|
| Symbol | |
|---|
| ID | 6782304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2682029 |
|---|
| End bp | 2682886 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768304 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002139116 |
|---|
| Protein GI | 197118689 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000048511 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA AAATCGGTTT TGTAGGTCTG GGTACCGTGG GTGTCCACAT GGCCGCCAAC
CTGGCCAAGT CGGACTACCA GTTAACGGTG TTTGATCAGG ATGCCAAGGC GGTTGCGGAA
CTGGCGACCT TGGGCGTCAA GGTCGGCGAG TCGCCCATGG CGACCGCAAA AGGGCAGGAC
CTCGTCATCG TCATCGTGCC TGATAGCGAC TTCCTAGTCT TCGGCCAAGA TGGCGTTTTT
GAAGGTATAG ACCCCGGTAC TATCCTCGTC GACATGGGAA CGCACTGCAT CGAGACCATC
CAGCGCATGG CCCAGGAGGC CGTGAAGCAC CGCGTCATGT TCCTTGAGGC TCCGGTATGG
GGAAGCAAGG AGCACGCGGC CAACGGTCTG CTGACCATTC TCGCCGGCGG GGACGAGGCG
CTTCTGGGCC GCTGCCGCGA GCCGTTCTCC TATTTCGGTC TCAACATCAT CCACATCGGC
AAAGTCGGCG ACGCCACCAG GATGAAGCTG ATCGTCAACC TGCTGCAGGC CGAGATGATG
CAGTCCCTTT CCGAAGGTCT CGTGTTCGGC GAGAAGATGG GATTCAAACC GGACAAGATC
CTCGAGGTGC TGGACTCCGG CGGTGTCGCC TCTCCGCTGT TCCACTCCAA GGGGCGCTCC
ATCGCCCGCG GCGATTTCAG CCGTAACCTG GCGCTCAAGT ACGTTCACCT CCAGATGCTG
AGGGTGCTCG AGACGGCCGA GAAACTTGGC CTGGAGCTTC CTGCCGCCAA GACCGTCTCC
GGCATTTTCG CCCAGGCGGT GGCCGACGGC AGGGGAGAAG AGGATTTCTC CGCCATCGTG
AAACTGCTGA GGAAATAG
|
|---|
| Protein sequence | MLKKIGFVGL GTVGVHMAAN LAKSDYQLTV FDQDAKAVAE LATLGVKVGE SPMATAKGQD
LVIVIVPDSD FLVFGQDGVF EGIDPGTILV DMGTHCIETI QRMAQEAVKH RVMFLEAPVW
GSKEHAANGL LTILAGGDEA LLGRCREPFS YFGLNIIHIG KVGDATRMKL IVNLLQAEMM
QSLSEGLVFG EKMGFKPDKI LEVLDSGGVA SPLFHSKGRS IARGDFSRNL ALKYVHLQML
RVLETAEKLG LELPAAKTVS GIFAQAVADG RGEEDFSAIV KLLRK
|
|---|
| |