| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2294 |
|---|
| Symbol | |
|---|
| ID | 6782290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2664329 |
|---|
| End bp | 2666956 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768290 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_002139102 |
|---|
| Protein GI | 197118675 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins
[COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA TCACCACGCA TCTAAACGCC GACTTCGACT GTATCGGCTC CATGGTTGCC
GCGAAGAAGC TTTACCCCGA GGCGCTCCTG GTCTTCTCAG GGGCCCAGGA GAAATCGGTT
CGGGATTTCT TCCAGAAGGG GCATCCCCAG GACCTCGAAT TCGCCCGCAT CAAGGAGATT
GATTTCTCCG CCATCACCCG CCTCATCGTA GTCGATTGCC AGCACTCCTC CCGCATCGGC
AAGTTCGGCG AACTCGCCAA AAGCGGCAGC GTCGAACTCC ACATCTACGA CCATCACCCA
ACCAGTTCCG GCGATATGGA GCCCACCGGC GGCGTCATCC GCCCCTGCGG TTCCACCACG
ACCATCCTGG CCGGCATGTT GATCGAGCGC GACGTCCAAG TTACCCCCTT TGAAGCCACC
GTGATGATGC TGGGGATCCA CGAGGACACC GGCAACCTGA CGTTCCCCTC CAGCACCGCT
GAAGACTACA CCGTGGCCGC GTGGCTCCTG GAGCGGGGCG CTTATCTCAA CGAAGTGGCC
GACTCCATCG GGCGGGAGCT GACCGTCGAG CAGGTGTCGC TTCTAAACGA CCTGCTGGTG
TCGCTTAAGA CCACCACCCT AAAGGGGGTC GACGTCTCGA TAGCCCACGC CTCGGTCGAC
CGCTACATAG GGGACATCGC CACCCTGGCG CACATGATCC GCGACATGGA GAACCTGCAG
GCGCTTTTCC TCGTGGTCGG GATGGAGGAC CGGGTCTTCG TCATCGCCAG GAGCCGGGTG
CCGGAGGTGC GGGTAGGGGA GATCCTGCAT GAACTGGGCG GGGGAGGGCA CGCCACGGCC
GCCTCGGCCA CGGTGCGCGG GCTCACCCTG ATCCAGGTGC TGGAGCGGCT GGACGCGGTG
CTCAGGCGCC GGGTGGACCC AAGGCGGGTG GCGCGCGACA TCATGTCGTC GCCGGTAAAG
ACCATATCCC CCGACTGCAG CATCGAGGAG GCGCGGGAGC GCCTGGTGCG CTACAACGTA
AGCGCCATGC CGGTCATATC AGAAGAGGGG GTGCTCGGGA TCATCTCCAG GAAGACTGTG
GAGAAGGCGC TCTACCACAA CCTGAACCAG GTGCCGGTGT CGGATTACAT GCACTCCGAG
TTCCACGTCG CCTCGCCCGA TACCCCCATC ACCGAGATCC AAAGTTACAT GGTCGGGGGG
GACGCCCGCC TGGTCCCGGT GGTCTCCGAG CTGGGGTTGA TTGGAGTGAT CACTCGCACC
GATCTGCTCC GCTACAGCTT AGGGGGCGAG GCGCTTTACG ATCTGTCGCG CGACGCACTC
CAGGTGAAGA GCCGGGAGGT GGAGGCGCTG ATGAACAAGC ACCTCCCGCA GCGCACCACC
GTCATCCTGC ACGACCTAGG GCGCGTCGGG GACCAGCTCG ACCTCACCGT CTACGCGGTC
GGAGGCTTCG TCCGCGACCT GCTTTTAGAT ATCCAGAACA TGGACATCGA CGTGACGGTG
GACGGCGACG GCATCCTCTT CGCCGAGACC TTCGCCTCCC AATTCGGCTG CCGGGTGAAA
AGCCACCAGA AGTTCGGCAC CGCGGTGATC GTCTTCCCGG ACGGCTTCAA GATCGACGTC
GCCAGCACCC GTCTGGAATA CTACGTCTCC CCCGGCGCGC TCCCTACCGT GGAGCGCTCT
TCGCTCAAGA TGGACCTGTA TCGGCGCGAC TTCACCGTCA ACACCCTCGC CATTGCCTTG
AACGGCGACT CCTTCGGCAA GCTCATCGAT TACTTCGGGG CCTACCGGGA CCTGCAGTCG
AGGGTGATCC GGGTGCTGCA CAACCTCTCC TTTGTCGAGG ACCCGACCCG CGTCTTCAGG
GCCATCCGTT TCGAGCAGAG GCTTAACTTC AAGATCGCCA AGCACACCGA GGACCTGATC
AAGAACGCGG TGAAGATGGA ATTCCTGGAA AAGCTCGGAG GGCGGAGGCT CCTCGCTGAG
CTGGTTCAGA TCCTGAGGGA GAAGGAGCCG CTCAAGGGAG TCGGGCGCAT GGCGTCGCTT
GGGCTTTTGC GTTTCATTCA CCCGGGCGTC GAACTGACCC CCGCCATGCA GGTAGCGCTG
GAGGAAACCC GCTACGTCGT CTCCTGGTTC GATCTCCTCT ACCTGGAACG CCCTTACGAA
AGCTGGTCGG TCTATTTCCT GACCCTGTGC GAGGGGCTCA CCGAAGAACA GTTCTGGGGA
ACCTGCACCC GCCTCGCCGT CGCCGAGCAT TACAAGGAGA GGCTGGTGGA GATGCGCCGG
CAGAGCGAGG AGCTGATCGG AAACCTGGAA AGAAAGCTGG CGCGTTCCGA GAAGGTCGAC
AACAGCGAGA TCTACTTCAC GCTCAGGGGG CTTCCAGTCG AGGTGCTCCT CTACCACATG
GCCAAAAGCC GTAGCGCCGA GGTAAAGCGG TGCATCTCAC TTTACTTCAC CAAGCTCGAC
GGCATGCATC CCCAGATCGG CGGTGAGGAT CTAAAGGAAC TCGGCGTAGA ACCGGGACCG
CTGTACCGGG AGTTGCTGGA CCTGGTTTTG AGCGCGCGGT TGAACGGTAA GGTCGCGAGC
CGCGAAGACG AGATCCAGTT GGTGCGCGAG GTGTTGGAGG GGGTGTAG
|
|---|
| Protein sequence | MDVITTHLNA DFDCIGSMVA AKKLYPEALL VFSGAQEKSV RDFFQKGHPQ DLEFARIKEI
DFSAITRLIV VDCQHSSRIG KFGELAKSGS VELHIYDHHP TSSGDMEPTG GVIRPCGSTT
TILAGMLIER DVQVTPFEAT VMMLGIHEDT GNLTFPSSTA EDYTVAAWLL ERGAYLNEVA
DSIGRELTVE QVSLLNDLLV SLKTTTLKGV DVSIAHASVD RYIGDIATLA HMIRDMENLQ
ALFLVVGMED RVFVIARSRV PEVRVGEILH ELGGGGHATA ASATVRGLTL IQVLERLDAV
LRRRVDPRRV ARDIMSSPVK TISPDCSIEE ARERLVRYNV SAMPVISEEG VLGIISRKTV
EKALYHNLNQ VPVSDYMHSE FHVASPDTPI TEIQSYMVGG DARLVPVVSE LGLIGVITRT
DLLRYSLGGE ALYDLSRDAL QVKSREVEAL MNKHLPQRTT VILHDLGRVG DQLDLTVYAV
GGFVRDLLLD IQNMDIDVTV DGDGILFAET FASQFGCRVK SHQKFGTAVI VFPDGFKIDV
ASTRLEYYVS PGALPTVERS SLKMDLYRRD FTVNTLAIAL NGDSFGKLID YFGAYRDLQS
RVIRVLHNLS FVEDPTRVFR AIRFEQRLNF KIAKHTEDLI KNAVKMEFLE KLGGRRLLAE
LVQILREKEP LKGVGRMASL GLLRFIHPGV ELTPAMQVAL EETRYVVSWF DLLYLERPYE
SWSVYFLTLC EGLTEEQFWG TCTRLAVAEH YKERLVEMRR QSEELIGNLE RKLARSEKVD
NSEIYFTLRG LPVEVLLYHM AKSRSAEVKR CISLYFTKLD GMHPQIGGED LKELGVEPGP
LYRELLDLVL SARLNGKVAS REDEIQLVRE VLEGV
|
|---|
| |