| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2267 |
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| Symbol | |
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| ID | 6782263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2635756 |
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| End bp | 2638164 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768263 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002139075 |
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| Protein GI | 197118648 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC ACTGGATTGA CCTGAAGAAC GCCGATGCCA TCCTGGCCAT CGGTTGCAAC
CCTGCAGAAA ACCACCCGAT CTCGATGAAA TGGATCGAGG CGGCTATGGA TAACGGCGGC
AAGCTTCTCG CCGTCGACCC GCGCTTCACC AGGACCGGCT CCAAGGCCGA TCACTACGCG
CAGATCCGTC CCGGCACCGA CATCGCCTTT TTGGGCGGGA TGATCAACTT CGCGCTGCAG
AACAACATGA TCCACGAGGA GTACGTCCGC GAGTACACCA ACGCCTCCTT CATCGTAAAC
GAGAAGTACG ACTTCAACGA GGGTATCTTC TGCGCCTTCG ACGACCAGGA GAAGACCTAT
GACCCGAAGG CCTGGGCCTA CGCGGTCGAC GGCTCCGGCA ACCCCAAGCG CGACAAGTCG
CTGAAGGACC CGCGCTGCGT CTACCAGCAG CTGAAGAAGC ACTACTCCCG CTACACCGTC
GACATGGTCT GCTCCATCAC CGGCACCAAG AAGGAAGACT ACGTCGCCGT CGCCAAGGCA
TTCTGCTCCA CCGGGCGCGC CGACAAGGCC GGCACCATCC TCTACGCGAT GGGTATCACA
CAGTCCACCC ACGGCACCCA GAACGTCCGC GCGACCGCCA TGCTGCAGAT GCTTTTGGGC
AACATCGGCA TCGCCGGCGG CGGCGTGAAT GCGCTGCGCG GCGAGAGCAA CGTACAGGGC
TCCTCCGATT ACGGCCTGCT CTTCCACCTG CTCCCGGGCT ACCTGAAGTC CCCTGAGTTC
GACAACGTCG ACCTGAAGGC CTACCTGGAG AAGTGGACCC CGAAGACCAA AGACGCAAAG
AGCGCCAACT GGTGGGGGAA CACCCCGAAG TACACGGTGA GCCTCCTCAA AGCCTGGTAC
GGCGACAACG CCACCGCGGA GAACGGCTTC TGCTACGACT ACCTCCCCAA GAGAAGCGGC
AACTACTCCT TCATGAAGCT GATGGAGAAG ATGGGCAAGG GCGAACTGCA GGGCCTCGTC
TGCATGGGGC AGAACCCGGC GGTAGGCGGC CCGGATTCCC TGAAGACCCG CGAGGCGCTG
GGAAAACTCG ACTGGCTCGT CACCGTCGAC CTCTGGGAGA CCGAGACCTC CATCTTCTGG
AAGCGCCCCG GCGTGAACCC GAAGGACATC AAGACCGAGG TCTTCATGCT GCCGGCAGCC
TCCTCCGTCG AGAAGGAAGG CTCCATCTCC AACTCCGGCC GCTGGGCCCA GTGGCGCTAC
AAGGCTGCGG AACCGGTAGG GGATGCGAAG AGCGACCTCT GGATCATCGA TCAGTTCGCG
AAGCACGTGA AGAAGGCGTA CCAGAAAGGG GGAACCTTCC CCGAGCCGAT CACCAAGCTC
TCCTGGAACT ACGGCGAAGG CCACGAGCCT GAAGTGCACC TGGTCGCCAA GGAGATCAAC
GGCTACTTCA CCAAGGACAT GACCATCGTC GACAAGGACA AGACCCTCGA GTTCAAGAAG
GGTGACCAGG TCCCGATGTT CAAGTACCTG CAGGACGACG GCTCCACCGT CTCCGGCTGC
TGGATCTACT GCGGCTCCTA CACGAAAGAC GGCAACCAGA TGGCCCGCCG CGACGCCACC
GACCCGACCG GGCTCGGCAT GTTCCCGAAG TGGTCCTGGT GCTGGCCGGT CAACCGCCGC
ATCATCTACA ACAGGGCCTC CGTTAACCCG GACGGCGCGC CGTTCAACCC CAAGCGCGCG
GTCATCGCCT GGGACGCGCT GGAGAAGAAG TGGAAAGGCG ACGTGCCCGA CGGCCCCTGG
CCGCCGATGA ACGACGCGAA GGAAGGGAAG TACCCCTTCA TCATGGTTCC TGAAGGTCAC
GGCCGCCTCT ACGCGCTAGA CATGAAGGAC GGTCCGTTCC CCGAGCACTA CGAGCCGATC
GAAAGCCCGG CCAAGAACCT CTTGTCCAAG GTGCAGAGCA ACCCGGCGGT CAAGGTCCCG
GCCAACATGT CCAGCGACCT GAACAAGTAC CCGTTCGTCG GCACCACCTA CAGGATGACC
GAGCACTGGC AGGCAGGCGC CATGACCCGC AGCCTTCCCT GGCTGGTGGA GCTGGTCCCG
ACCATGTTCG TCGAGATCTC CCAGACCCTC GCCTCCTCCA AGGGGATCAA CAACGGCGAC
CAGGTGAAGA TCACCACCGA GCGCGGTTCC ATCGAGGCGA AGGCCCTGGT CACCACCAGG
CTCAAGCCCT TCAACGTGCA GGGGAAAATG GTAGAGCAGG TGGGCCTTCC CTGGCACTTC
GGTTATGCAG GTCTCGCTAC CGGCGACTCG GGCAACGTCC TGACCCCGTC CGTCGGCTGC
GCCAATACGA GCATCCCCGA ATTCAAGGCA TTCCTCTGCA ACATCGAGAA AGGGGGTAAA
CGCGCATGA
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| Protein sequence | MTNHWIDLKN ADAILAIGCN PAENHPISMK WIEAAMDNGG KLLAVDPRFT RTGSKADHYA
QIRPGTDIAF LGGMINFALQ NNMIHEEYVR EYTNASFIVN EKYDFNEGIF CAFDDQEKTY
DPKAWAYAVD GSGNPKRDKS LKDPRCVYQQ LKKHYSRYTV DMVCSITGTK KEDYVAVAKA
FCSTGRADKA GTILYAMGIT QSTHGTQNVR ATAMLQMLLG NIGIAGGGVN ALRGESNVQG
SSDYGLLFHL LPGYLKSPEF DNVDLKAYLE KWTPKTKDAK SANWWGNTPK YTVSLLKAWY
GDNATAENGF CYDYLPKRSG NYSFMKLMEK MGKGELQGLV CMGQNPAVGG PDSLKTREAL
GKLDWLVTVD LWETETSIFW KRPGVNPKDI KTEVFMLPAA SSVEKEGSIS NSGRWAQWRY
KAAEPVGDAK SDLWIIDQFA KHVKKAYQKG GTFPEPITKL SWNYGEGHEP EVHLVAKEIN
GYFTKDMTIV DKDKTLEFKK GDQVPMFKYL QDDGSTVSGC WIYCGSYTKD GNQMARRDAT
DPTGLGMFPK WSWCWPVNRR IIYNRASVNP DGAPFNPKRA VIAWDALEKK WKGDVPDGPW
PPMNDAKEGK YPFIMVPEGH GRLYALDMKD GPFPEHYEPI ESPAKNLLSK VQSNPAVKVP
ANMSSDLNKY PFVGTTYRMT EHWQAGAMTR SLPWLVELVP TMFVEISQTL ASSKGINNGD
QVKITTERGS IEAKALVTTR LKPFNVQGKM VEQVGLPWHF GYAGLATGDS GNVLTPSVGC
ANTSIPEFKA FLCNIEKGGK RA
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