| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2236 |
|---|
| Symbol | |
|---|
| ID | 6782232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2602657 |
|---|
| End bp | 2604657 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642768232 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_002139044 |
|---|
| Protein GI | 197118617 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG TAGCATTAAG GGACATAGTG GTTCTTTTCG GGTTGGCGCT TTTAACGGTG
CTGCTGTTGC GCCGTTTCAA TCTCCCTTCC ATCATAGGTT TTCTCATCAC CGGGGTCGTG
GCCGGCCCCC ATGCCCTGCG CTTCATCAAA AACGCCCACC AGGTCGAGCA GATGGCGGAG
ATCGGCGTGG TGCTCCTTCT TTTCACCATC GGCATCGAAT TCTCCTTGAA GGAGCTGATG
CGCATCCGGC ACATGGTGCT TTTGGGCGGC GGCCTGCAAC TGGCGCTCAC TATCGCGGTG
GTGGCGGTCA TCGGCACCCT TTACGGCTTT CCCATGTCTC AGGGGGTCTT TTTCGGCTTC
CTGGTGGCCC TCTCCTCGAC CGCCATCTTG CTGAAGCTGA TGATGGACGC AGGCGAGACG
GATACGCCGC AGGGAAAGAC CGCGCTCGGC ATCCTCATCT TCCAGGACCT CTGCATCGTG
CCGCTCATGC TCTTCACCCC TTTTCTCGCC GGCGGCGGCA GCGGGCTGGT GGATATAGCG
ATCGTCTCCG CCAAGGCTGT CGCCGTCGTG GTCGGAGCCC ATTTCGGGGC CAGGTTCGTC
ATCCCGTGGA TCTTCGAGCA GGTGGTGAAG ACCAGGAGCC GGGAACTGTT TGTGCTCAGC
ATCATCTTCA TCGGCATGGG AACCGCTTGG CTCACCTCCC ACGCGGGGCT TTCGCTTGCC
TTAGGCGCCT TCATCGCCGG CCTTGCCATC TCCGAGTCGG AGTACAGCCA CCAGGCCTTA
AGCGACATCA TGCCCTTTCG CGAAGCCTTC ATGAGCCTCT TTTTCATCTC GGTGGGGATG
CTGCTCAAGC CCACCATCCT GCTCAAGTTC CCCTTTTTGC TCATCGGGAT GGTGCTAGCC
ATCATCCTGA TCAAAACGGT CCTTTCTGCG GCGGTGGTGT TCGTACTGGG GCTCCCCATG
CGCATCGCCA TCATCGCGGC GCTCTCCCTG GCCCAGATCG GCGAATTTTC CTTCGTCCTT
TCCAGAAGCG GCCTCTCGCA CGGGCTCCTC ACCCCCGAGA CCTACCAGCT CTTTTTGGCC
GCGTCCATCG CGACCATGGC GCTCACCCCC CTCTGCATGA AGGTCTCCGG CCCGGTCGCC
GATTACCTGA CGAAGCTGCT GCCGCACGAA TGGACCCGGG GGAGGAGCTC CCTCGCGCAA
AACGGAGATA AGGTTACCCT GGACGACCAC ATCATCATCG TCGGCTTCGG CGTGAACGGG
AAGAATCTGG CCCGGGTGCT CAAGAACCTG GAGATCCCGC ACGTCGCCAT CGACACCAAC
CCCTTCACGG TCCGCAACCA GACCCGCATG GGGGAACAGA TCATTTTCGG CGACGCTTCC
AAACCCGAGA TCCTCACCCA CGCAGGTATC GAGCAGGCAC GCATCGTCGT GGTCGCCATC
TCCGACGCAG CCGCCAGCAG GCGTCTCGTC TCCCTGGCTA GGAAGATGAA CCCGTCGATC
CATGTCATCG TGCGTACCCG CTACCTCCTG GAGATGGAGC CTCTCTTCAT GCTGGGGGCA
AACGAGGTGA TACCGGAGGA GTTCGAGACG TCGGTGGAGA TTCTCTCCAG GGTGCTGAAG
CGCTTTTTGA TCCCGCAGGA CGTGGTGGAG GAATGCATAG CCGACGTGCG GCGGGACGGC
TACGAGATGT TGCGCACGGC GAGCAAAAGG CACAGCCATG CCGTCGGCAT CACCGGCTTT
CTATCGGGCG CCGAAGTGGG GAGCTTCAGG GTGCAGAAAG GGTCGCCGGT TGAAGGCGAG
TCCTTGAGGG AGGGGCTATT GCGCGCGCAA TCGGGGGTTA CGCTGGTAGC GGTGAAGCGC
GGCTCCGACA TCACCCCCAA CCCCGACCCG GTCTGGCAGT TCAGCGAGAA CGACATCGCG
CTCGTTCTCG GCACGCCCGA GCAGATGCGG GCGGCGGCAA AGCTCTTCGA GCCGGCGAGA
GCCGCCGCCG GCGTAACCTG A
|
|---|
| Protein sequence | MEFVALRDIV VLFGLALLTV LLLRRFNLPS IIGFLITGVV AGPHALRFIK NAHQVEQMAE
IGVVLLLFTI GIEFSLKELM RIRHMVLLGG GLQLALTIAV VAVIGTLYGF PMSQGVFFGF
LVALSSTAIL LKLMMDAGET DTPQGKTALG ILIFQDLCIV PLMLFTPFLA GGGSGLVDIA
IVSAKAVAVV VGAHFGARFV IPWIFEQVVK TRSRELFVLS IIFIGMGTAW LTSHAGLSLA
LGAFIAGLAI SESEYSHQAL SDIMPFREAF MSLFFISVGM LLKPTILLKF PFLLIGMVLA
IILIKTVLSA AVVFVLGLPM RIAIIAALSL AQIGEFSFVL SRSGLSHGLL TPETYQLFLA
ASIATMALTP LCMKVSGPVA DYLTKLLPHE WTRGRSSLAQ NGDKVTLDDH IIIVGFGVNG
KNLARVLKNL EIPHVAIDTN PFTVRNQTRM GEQIIFGDAS KPEILTHAGI EQARIVVVAI
SDAAASRRLV SLARKMNPSI HVIVRTRYLL EMEPLFMLGA NEVIPEEFET SVEILSRVLK
RFLIPQDVVE ECIADVRRDG YEMLRTASKR HSHAVGITGF LSGAEVGSFR VQKGSPVEGE
SLREGLLRAQ SGVTLVAVKR GSDITPNPDP VWQFSENDIA LVLGTPEQMR AAAKLFEPAR
AAAGVT
|
|---|
| |