| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2219 |
|---|
| Symbol | |
|---|
| ID | 6782215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2582392 |
|---|
| End bp | 2583525 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768215 |
|---|
| Product | Cys/Met metabolism pyridoxal-phosphate-dependent protein |
|---|
| Protein accession | YP_002139027 |
|---|
| Protein GI | 197118600 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.201803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG CGACCGAACT GATACACGGC GGAGCCCCGA TTGACCCGGA GCACGGCTCC
CTGAGCCACC CCATCTACCT GAGCTCCACC TTTGCCCAGC GCTCCATGGA GCACTTCGGC
AGGTACGACT ACTCCCGCTC GGGGAACCCC ACCCGCGAGG CGCTCGAAGA GGCGGTGGCC
GGGCTTGAGA AAGGCGCCGT CGGCCTTGCC TTCGCCTCCG GCATGGCAGC CATCTCCTCC
ACCCTGCTCA TCTTCGCGCC GGGCGACCAT CTGGTTGTCT GCGAAGACGT CTACGGCGGG
ACCTTCCGCG CCCTCACCAC CGTATTGAAG GGTTGGGGGT TGAACGCCAC CTTCGTCGAC
GCGACCGATA CGGCCGCTAT CGCCGCCGCC ATCAGGCCCG AGACCAAGGC GCTCTACCTG
GAGACCCCCT CCAACCCGCT CATCAAGATC ACCGACCTAA AGGGAGCCGC GGCGCTCGCC
AAGGAGAAGG GGATCCTCAC CATCGTCGAC AACACCTTCA TGACCCCGTA CTTGCAGCGC
CCGCTGGAAC TTGGGTGCGA CATCGTGCTC CACAGCGGCA CCAAGTTCCT GAACGGCCAC
TCCGACGTCC TCTGCGGCTT CGCCGTCGCC AAGGACCCGG CAGTAGGCCA AAGGATCCGC
TTCATCCAGA ACGCCTTCGG CGCCGTCCTC GGGCCGCAGG ACTGCTGGCT GGTTTTGCGC
GGACTGAAAA CCTTGAAGGT GCGCATGGAA GAGCACCAGG CAAGCGCCAA GGTGATCGTC
TCCTGGCTCA AAGAGCAGAA GGAAGTGGCG AAGATTTACT ACCCCGGGCT TCCCGAGCAT
CCCGGCTACG AGATCCACAA CGCCCAGTCC GCCGGCCCGG GCGCCGTACT TTCCTTCGAG
TTGTCCAGTT ATGAAGTGAC CAGGAAGCTA CTGGAAGGGG TGAAATTGTC CGCATTCGCC
GTGAGCCTGG GAGGGGTGGA AAGCATCCTC TCCTACCCCG CCAAGATGTC GCACGCCGCC
ATGCCCCCCG CCGAGCGCGA GGCCAGGGGA ATCAAGGACA CGCTGGTGCG TCTGTCGGTA
GGGTTAGAGG ACCCCGAGGA CCTGATCGCC GACATGGAGA GTTCCCTTAG ATAA
|
|---|
| Protein sequence | MKFATELIHG GAPIDPEHGS LSHPIYLSST FAQRSMEHFG RYDYSRSGNP TREALEEAVA
GLEKGAVGLA FASGMAAISS TLLIFAPGDH LVVCEDVYGG TFRALTTVLK GWGLNATFVD
ATDTAAIAAA IRPETKALYL ETPSNPLIKI TDLKGAAALA KEKGILTIVD NTFMTPYLQR
PLELGCDIVL HSGTKFLNGH SDVLCGFAVA KDPAVGQRIR FIQNAFGAVL GPQDCWLVLR
GLKTLKVRME EHQASAKVIV SWLKEQKEVA KIYYPGLPEH PGYEIHNAQS AGPGAVLSFE
LSSYEVTRKL LEGVKLSAFA VSLGGVESIL SYPAKMSHAA MPPAEREARG IKDTLVRLSV
GLEDPEDLIA DMESSLR
|
|---|
| |