Gene Gbem_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2198 
Symbol 
ID6782192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2557811 
End bp2558587 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID642768192 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002139006 
Protein GI197118579 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00658459 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATC TGCACCGTTT TTCCCGCACC GAACTCCTTA TCGGCCCCCA GGGCCTCAAC 
AAGCTCGCCG AATCCACCGT CGCCATCTTC GGGCTGGGCG GGGTAGGCAG TTACGCAGCC
GAGGCACTCT GCCGGGCAGG CGTGGGCCGC CTGGTCATCG TCGACTTCGA CGAGATCTGC
CTCACCAACG TGAACCGACA GCTGCACGCC ATGGACGGAA CCGTCGGCAA GGCCAAGGCC
CAGGTCATGG CCGAGCGCAT GCGCCAGATC AACCCCAAGG CCGAGATCGT CCCCTACCAG
GATTTCTACT CCGCCGAGAA CAGCGACTTC CTCCTTGCCG ACGGCTACGA TTACGTCGTC
GACGCCATCG ACCATATCAC CAGCAAACTG CACCTGATCC GCACCTGCCG GGAGCGCAAC
ATCCCCATCA TCTCCAGTAT GGGTGCCGCG GCGAAGCTCG ATCCGACCAA GATCGGGGTG
GCCGACATCT CCCAGACCAA CAAGTGCCGC ATGGCGCGCT CGGTAAGGAA ACTCTTGAAG
AAGCAGGGGA TCGAGACCGG CGTGAAGGTG GTTTTTTCCA CCGAGGAGTA CCGCGAGCAG
CTGATAAAAG ACGGCGGCTG CAAGGGGAAC TGCATCTGCC CCAACAAGGA CGAACAGAAG
TTCTCCTGCG AGCACCGCCG CGTCATCCTG GGTAGCGTAT CCTTCATCCC CTCCATCTTC
GGACTCACCA TGGCAGGCGT CGTGGTGAAC GACCTTCTGG CGGGAACGGC GAGCTAG
 
Protein sequence
MSNLHRFSRT ELLIGPQGLN KLAESTVAIF GLGGVGSYAA EALCRAGVGR LVIVDFDEIC 
LTNVNRQLHA MDGTVGKAKA QVMAERMRQI NPKAEIVPYQ DFYSAENSDF LLADGYDYVV
DAIDHITSKL HLIRTCRERN IPIISSMGAA AKLDPTKIGV ADISQTNKCR MARSVRKLLK
KQGIETGVKV VFSTEEYREQ LIKDGGCKGN CICPNKDEQK FSCEHRRVIL GSVSFIPSIF
GLTMAGVVVN DLLAGTAS