| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2194 |
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| Symbol | |
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| ID | 6782188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2553638 |
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| End bp | 2555392 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768188 |
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| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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| Protein accession | YP_002139002 |
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| Protein GI | 197118575 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00113388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAA TACTTTCCGG CAACGAAGCC ATTGCCAGGG GTGCTTACGA GGCAGGGGTG
AAAGTTGCCT GTGCTTACCC TGGTACCCCC TCCACCGAAA TACTGGAAAA CACCATCCGG
TACCAGGAGA TCGACTCCTC CTGGGCCACC AACGAAAAGG TCGCGCTGGA AGTCGGCATC
GGCGCCTCTT TCGTCGGCGC CCGCTCCCTG GTCACCATGA AGCACGTCGG CGTCAACGTA
GCAGCCGATC CTCTCTTCAC CCTTTCTTAC ACCGGCGTCA ACGGTGGGCT CCTGCTGATC
TGTGCCGATG ACCCGGAGCT CCATTCCTCC CAGAACGAAC AGGACAGCCG CAACTACGCC
AAGTTCGCCA AGATCCCGAT GCTGGAGCCG GCTGATTCGC AGGAATGCCT TGAGTTCACC
AAGCTCGCCT ACGAGATCTC GGAGCGTCAC GACACCCCGG TCATGCTCCG CACCACCACC
CGCATCTCGC ACAGCAAGTC GGTGGTGACG CTGGGCGAGA GGGTCGCCGC CGTCGCCGAG
CCGAAACTGG CGCGCAATGC CGCCAAGTTC GTCATGCTCC CGGGCAACGC CCGCGGGCGT
CACTACGTCG TCGAGGACCG GATCACCACC CTCTCCAAGG AAGGGTGCTC CATGGCCATC
AACAGGATGG AGCTGCGCGA CAAGAAGATC GGCGTCATCA CCGCCGGGAT CAGCTACCAG
CACGTGCGCG AGGCGCTCCC CGAGGCATCG GTGTTGAAGC TCGGCATGGT GTTCCCGCTT
CCCTTCGACC TGATCCGCGA GTTCGCCTCC AAGGTGGACA AGCTCTACGT GGTCGAGGAA
CTCGACGCCT TCATCGAGGA CCAGGTGAAA GCGATCGGCA TCCCGGTGAC CGGCAAGGAG
ATCATCTCCC TTTGCGGCGA ACTGACCCCC GGCCGGGTCA GGAAAGCTTT CGGCCTCCCC
GAGAACGCAC AGGGGACCGT AGAGAAACTC CCGGGTCGCC CCCCCAACAT GTGCCCGGGC
TGTCCGCACC GCGGCGTGTT CTACACCCTG AAACAGCTGA ACGCCTACGT CTCCGGCGAT
ATCGGTTGCT ACACCCTGGG CTTCATGCCG CCTCTTTCCG CCATGGACAC CTGCGTCTGC
ATGGGCGCCT CCATCGGCAT GGCGACCGGC GCCTCCAAGG TACTCTCCCC GGAGGAGAGG
AAAAAGGTTG TGGCCGTGAT CGGCGACTCG ACCTTCCTCC ACACCGGCAT CAACGGCCTC
ATGGACATGG TCTACAACAA GGGGGCCGCG ACGGTCATCA TCCTGGACAA CAGGATCACC
GCCATGACCG GGCGCCAGGA AAATCCCGGT TCCGGCCATA CCCTCATGAG CGAGCCGACC
AACGCCATCG ATTTCCCGAT GCTTTGCCAG GCGATCGGCG TGAAGAACAT CCGCACCATC
AACCCGCTGG ATCTGGACGA GTGCCAGAGG GTGATCTCCG AAGAGATGGA GCGCCCCGAG
ACCTCGGTCA TCATCACCGA CAAGCCGTGC GTCCTCATCA AGAAGGAAGG GGTCTTCACC
CCGGGCAAGC CGCTTGCTGT CGCCGAGGAT AGTTGCATTG GCTGCCGCGC CTGCCTCAAG
ATCGGCTGCC CGGCCATCGA GTGGGTCCCC ACCAGCGGCA AGAAGGGCCA AGCCAAGATC
GATCCGCTTT TGTGCAACGG TTGCGACGTC TGCAGGCAGC TGTGCAAGTT TTCTGCGATT
CAGGAGGCGA AATGA
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| Protein sequence | MKEILSGNEA IARGAYEAGV KVACAYPGTP STEILENTIR YQEIDSSWAT NEKVALEVGI
GASFVGARSL VTMKHVGVNV AADPLFTLSY TGVNGGLLLI CADDPELHSS QNEQDSRNYA
KFAKIPMLEP ADSQECLEFT KLAYEISERH DTPVMLRTTT RISHSKSVVT LGERVAAVAE
PKLARNAAKF VMLPGNARGR HYVVEDRITT LSKEGCSMAI NRMELRDKKI GVITAGISYQ
HVREALPEAS VLKLGMVFPL PFDLIREFAS KVDKLYVVEE LDAFIEDQVK AIGIPVTGKE
IISLCGELTP GRVRKAFGLP ENAQGTVEKL PGRPPNMCPG CPHRGVFYTL KQLNAYVSGD
IGCYTLGFMP PLSAMDTCVC MGASIGMATG ASKVLSPEER KKVVAVIGDS TFLHTGINGL
MDMVYNKGAA TVIILDNRIT AMTGRQENPG SGHTLMSEPT NAIDFPMLCQ AIGVKNIRTI
NPLDLDECQR VISEEMERPE TSVIITDKPC VLIKKEGVFT PGKPLAVAED SCIGCRACLK
IGCPAIEWVP TSGKKGQAKI DPLLCNGCDV CRQLCKFSAI QEAK
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