Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2194 |
Symbol | |
ID | 6782188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2553638 |
End bp | 2555392 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768188 |
Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_002139002 |
Protein GI | 197118575 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00113388 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA TACTTTCCGG CAACGAAGCC ATTGCCAGGG GTGCTTACGA GGCAGGGGTG AAAGTTGCCT GTGCTTACCC TGGTACCCCC TCCACCGAAA TACTGGAAAA CACCATCCGG TACCAGGAGA TCGACTCCTC CTGGGCCACC AACGAAAAGG TCGCGCTGGA AGTCGGCATC GGCGCCTCTT TCGTCGGCGC CCGCTCCCTG GTCACCATGA AGCACGTCGG CGTCAACGTA GCAGCCGATC CTCTCTTCAC CCTTTCTTAC ACCGGCGTCA ACGGTGGGCT CCTGCTGATC TGTGCCGATG ACCCGGAGCT CCATTCCTCC CAGAACGAAC AGGACAGCCG CAACTACGCC AAGTTCGCCA AGATCCCGAT GCTGGAGCCG GCTGATTCGC AGGAATGCCT TGAGTTCACC AAGCTCGCCT ACGAGATCTC GGAGCGTCAC GACACCCCGG TCATGCTCCG CACCACCACC CGCATCTCGC ACAGCAAGTC GGTGGTGACG CTGGGCGAGA GGGTCGCCGC CGTCGCCGAG CCGAAACTGG CGCGCAATGC CGCCAAGTTC GTCATGCTCC CGGGCAACGC CCGCGGGCGT CACTACGTCG TCGAGGACCG GATCACCACC CTCTCCAAGG AAGGGTGCTC CATGGCCATC AACAGGATGG AGCTGCGCGA CAAGAAGATC GGCGTCATCA CCGCCGGGAT CAGCTACCAG CACGTGCGCG AGGCGCTCCC CGAGGCATCG GTGTTGAAGC TCGGCATGGT GTTCCCGCTT CCCTTCGACC TGATCCGCGA GTTCGCCTCC AAGGTGGACA AGCTCTACGT GGTCGAGGAA CTCGACGCCT TCATCGAGGA CCAGGTGAAA GCGATCGGCA TCCCGGTGAC CGGCAAGGAG ATCATCTCCC TTTGCGGCGA ACTGACCCCC GGCCGGGTCA GGAAAGCTTT CGGCCTCCCC GAGAACGCAC AGGGGACCGT AGAGAAACTC CCGGGTCGCC CCCCCAACAT GTGCCCGGGC TGTCCGCACC GCGGCGTGTT CTACACCCTG AAACAGCTGA ACGCCTACGT CTCCGGCGAT ATCGGTTGCT ACACCCTGGG CTTCATGCCG CCTCTTTCCG CCATGGACAC CTGCGTCTGC ATGGGCGCCT CCATCGGCAT GGCGACCGGC GCCTCCAAGG TACTCTCCCC GGAGGAGAGG AAAAAGGTTG TGGCCGTGAT CGGCGACTCG ACCTTCCTCC ACACCGGCAT CAACGGCCTC ATGGACATGG TCTACAACAA GGGGGCCGCG ACGGTCATCA TCCTGGACAA CAGGATCACC GCCATGACCG GGCGCCAGGA AAATCCCGGT TCCGGCCATA CCCTCATGAG CGAGCCGACC AACGCCATCG ATTTCCCGAT GCTTTGCCAG GCGATCGGCG TGAAGAACAT CCGCACCATC AACCCGCTGG ATCTGGACGA GTGCCAGAGG GTGATCTCCG AAGAGATGGA GCGCCCCGAG ACCTCGGTCA TCATCACCGA CAAGCCGTGC GTCCTCATCA AGAAGGAAGG GGTCTTCACC CCGGGCAAGC CGCTTGCTGT CGCCGAGGAT AGTTGCATTG GCTGCCGCGC CTGCCTCAAG ATCGGCTGCC CGGCCATCGA GTGGGTCCCC ACCAGCGGCA AGAAGGGCCA AGCCAAGATC GATCCGCTTT TGTGCAACGG TTGCGACGTC TGCAGGCAGC TGTGCAAGTT TTCTGCGATT CAGGAGGCGA AATGA
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Protein sequence | MKEILSGNEA IARGAYEAGV KVACAYPGTP STEILENTIR YQEIDSSWAT NEKVALEVGI GASFVGARSL VTMKHVGVNV AADPLFTLSY TGVNGGLLLI CADDPELHSS QNEQDSRNYA KFAKIPMLEP ADSQECLEFT KLAYEISERH DTPVMLRTTT RISHSKSVVT LGERVAAVAE PKLARNAAKF VMLPGNARGR HYVVEDRITT LSKEGCSMAI NRMELRDKKI GVITAGISYQ HVREALPEAS VLKLGMVFPL PFDLIREFAS KVDKLYVVEE LDAFIEDQVK AIGIPVTGKE IISLCGELTP GRVRKAFGLP ENAQGTVEKL PGRPPNMCPG CPHRGVFYTL KQLNAYVSGD IGCYTLGFMP PLSAMDTCVC MGASIGMATG ASKVLSPEER KKVVAVIGDS TFLHTGINGL MDMVYNKGAA TVIILDNRIT AMTGRQENPG SGHTLMSEPT NAIDFPMLCQ AIGVKNIRTI NPLDLDECQR VISEEMERPE TSVIITDKPC VLIKKEGVFT PGKPLAVAED SCIGCRACLK IGCPAIEWVP TSGKKGQAKI DPLLCNGCDV CRQLCKFSAI QEAK
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