Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2189 |
Symbol | |
ID | 6782183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2548611 |
End bp | 2549750 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768183 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002138997 |
Protein GI | 197118570 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAAAAC TGTTTACCAC TGCTCTTGCA CTATTTACCT TGCTCTGCCT TTCCACCGTG GCCTTTGCCG CCGCTCCCAT TAAGATCGGC GCGCTTTTCG CCGTGACCGG CCCCGCCTCT TTCCTGGGGG AGCCTGAGCG CAACACCGCT CAGATGGTGG TCGACGAGAT CAACAAGGCA GGCGGCGTAA AAGGTCGCAA GATCGAACTG ATCACCTACG ACACCGGTGG CGACGCCACC AAGGCCGTGC AGCTCGCCAA CAAGCTGGTC AAGAACGACA ATGTCGTGGC CATCATCGGT CCCAGCACCA CCGGCGACAG CATGGCTATC ATCCCGGTGG TCGAGAAGGC CGGGATCCCG CTCATCTCCT GCGCTGCCGG GAGCAAGATC ACCGAGCCGG TGAAAAAGTG GGTTTTCAAG ACCGCCCAGA ACGACGGGCT CGCCGTCGCC AGGATCTATG AGCAGCTGAA AAAAGAGAAA AAGACCAAGG TGGCGATACT CACCGTCTCC GACGGCTTCG GCTCCTCCGG GCGCGAGCAG TTGAAGGCCC AGGCGAAGGT CCATGGCATC CAGATCATTT CCGACGACAC CTACGGCCCG AAGGACACCG ACATGACCGC GCAGCTCGCC AAGATCCGCG GCTCGCAGGC GCAGGCGGTG ATCTGCTGGG GCACCAACCC CGGTCCCGCC GTGGTGGCAA GAAACGCCAA GCAGCTCGGC CTCAAAATCC CGCTCTACAT GAGCCACGGC GTTTCCTCCA AGAAGTTCAT CGAGCTGGCC GGGGACTCGG CAGAGGGTAT CAGGCTCCCC TCCGGGAAGG TGCTGGTCGC CGACCTGCTG CCGAAAACCG ACAGGCAGAA AGGGTCGCTC CTTGCCTTCA TCAAGGACTA CCAGAACCAC TACAAGGCCG AGGGCGACCA CTTCGGCGGC CACGCCTGGG ACGCGGTTAT GCTCCTTAAA GGTGCCATCG AGAGGGGAGG GGACACCCCC GCCGGTATCC GCAACGCTCT GGAGGCAACC CGCAACTTCG CCGGCATCGG CGGCGTTTTC AACTTCTCGC CCAGGGACCA CGCAGGCCTG ACGAAAGACG CCTTCACCCT GGTTGAAGTA CGCAAAAAAG ACTGGGTGCT GGTCAAGTAA
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Protein sequence | MRKLFTTALA LFTLLCLSTV AFAAAPIKIG ALFAVTGPAS FLGEPERNTA QMVVDEINKA GGVKGRKIEL ITYDTGGDAT KAVQLANKLV KNDNVVAIIG PSTTGDSMAI IPVVEKAGIP LISCAAGSKI TEPVKKWVFK TAQNDGLAVA RIYEQLKKEK KTKVAILTVS DGFGSSGREQ LKAQAKVHGI QIISDDTYGP KDTDMTAQLA KIRGSQAQAV ICWGTNPGPA VVARNAKQLG LKIPLYMSHG VSSKKFIELA GDSAEGIRLP SGKVLVADLL PKTDRQKGSL LAFIKDYQNH YKAEGDHFGG HAWDAVMLLK GAIERGGDTP AGIRNALEAT RNFAGIGGVF NFSPRDHAGL TKDAFTLVEV RKKDWVLVK
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