Gene Gbem_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2189 
Symbol 
ID6782183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2548611 
End bp2549750 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID642768183 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002138997 
Protein GI197118570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAAC TGTTTACCAC TGCTCTTGCA CTATTTACCT TGCTCTGCCT TTCCACCGTG 
GCCTTTGCCG CCGCTCCCAT TAAGATCGGC GCGCTTTTCG CCGTGACCGG CCCCGCCTCT
TTCCTGGGGG AGCCTGAGCG CAACACCGCT CAGATGGTGG TCGACGAGAT CAACAAGGCA
GGCGGCGTAA AAGGTCGCAA GATCGAACTG ATCACCTACG ACACCGGTGG CGACGCCACC
AAGGCCGTGC AGCTCGCCAA CAAGCTGGTC AAGAACGACA ATGTCGTGGC CATCATCGGT
CCCAGCACCA CCGGCGACAG CATGGCTATC ATCCCGGTGG TCGAGAAGGC CGGGATCCCG
CTCATCTCCT GCGCTGCCGG GAGCAAGATC ACCGAGCCGG TGAAAAAGTG GGTTTTCAAG
ACCGCCCAGA ACGACGGGCT CGCCGTCGCC AGGATCTATG AGCAGCTGAA AAAAGAGAAA
AAGACCAAGG TGGCGATACT CACCGTCTCC GACGGCTTCG GCTCCTCCGG GCGCGAGCAG
TTGAAGGCCC AGGCGAAGGT CCATGGCATC CAGATCATTT CCGACGACAC CTACGGCCCG
AAGGACACCG ACATGACCGC GCAGCTCGCC AAGATCCGCG GCTCGCAGGC GCAGGCGGTG
ATCTGCTGGG GCACCAACCC CGGTCCCGCC GTGGTGGCAA GAAACGCCAA GCAGCTCGGC
CTCAAAATCC CGCTCTACAT GAGCCACGGC GTTTCCTCCA AGAAGTTCAT CGAGCTGGCC
GGGGACTCGG CAGAGGGTAT CAGGCTCCCC TCCGGGAAGG TGCTGGTCGC CGACCTGCTG
CCGAAAACCG ACAGGCAGAA AGGGTCGCTC CTTGCCTTCA TCAAGGACTA CCAGAACCAC
TACAAGGCCG AGGGCGACCA CTTCGGCGGC CACGCCTGGG ACGCGGTTAT GCTCCTTAAA
GGTGCCATCG AGAGGGGAGG GGACACCCCC GCCGGTATCC GCAACGCTCT GGAGGCAACC
CGCAACTTCG CCGGCATCGG CGGCGTTTTC AACTTCTCGC CCAGGGACCA CGCAGGCCTG
ACGAAAGACG CCTTCACCCT GGTTGAAGTA CGCAAAAAAG ACTGGGTGCT GGTCAAGTAA
 
Protein sequence
MRKLFTTALA LFTLLCLSTV AFAAAPIKIG ALFAVTGPAS FLGEPERNTA QMVVDEINKA 
GGVKGRKIEL ITYDTGGDAT KAVQLANKLV KNDNVVAIIG PSTTGDSMAI IPVVEKAGIP
LISCAAGSKI TEPVKKWVFK TAQNDGLAVA RIYEQLKKEK KTKVAILTVS DGFGSSGREQ
LKAQAKVHGI QIISDDTYGP KDTDMTAQLA KIRGSQAQAV ICWGTNPGPA VVARNAKQLG
LKIPLYMSHG VSSKKFIELA GDSAEGIRLP SGKVLVADLL PKTDRQKGSL LAFIKDYQNH
YKAEGDHFGG HAWDAVMLLK GAIERGGDTP AGIRNALEAT RNFAGIGGVF NFSPRDHAGL
TKDAFTLVEV RKKDWVLVK