| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2167 |
|---|
| Symbol | |
|---|
| ID | 6782161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2525107 |
|---|
| End bp | 2525775 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642768161 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_002138975 |
|---|
| Protein GI | 197118548 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA TTGAGATCAA GGATGTGAAG AAGCAGTATC AGACCGGGTC GGACATGGTC
GAGGCCCTGC GCGGCGTGGA CATCAGCATC GAGGCGGGTG AGTTCATCAC CATCATGGGG
CAGTCCGGCT CCGGCAAGAG CACGCTCCTG TCGGTCCTGG GGGGGATGAA CCATCCCACC
AGCGGCGAGG TGGAGATGGC GGGGGTGAAG CTCTACCAGC TTCCCAGCGA GAAACTGGCC
GATTTCCGTG CGCAGAACCT GGGTTTCGTC TTCCAGTCCT TCCACCTGAT CCAGTATCTG
ACCGCGCTGG AGAACGTGAT GCTGCCGCTC GCCATCGTCA AGATGAGCAC TGCAGCAAAG
AAGGACGCCG CCCGCACTGC TCTGGAGCGT GTAGGGCTTG GCGGCAAAGC GGACCGGCTC
CCTAACCAGC TCTCCGGCGG CGAGCAGGAA AGGGTCGCCA TCGCCCGCGC CATAGTGAAC
AACCCGCACA TCCTGCTGGC GGACGAGCCG ACTGGAAATC TTGACTCCAA AACCAGCGAG
GAAGTCATGG CGCTATTCCG GCAACTGAAT GAGGCGGGCC AGACCGTGGT GATGGTCACT
CATAACCCGG AAAACGGCGC TTACTCCGAT AGGACCATAA GCTTGAGAGA CGGCCTGATC
AGCGCATAA
|
|---|
| Protein sequence | MALIEIKDVK KQYQTGSDMV EALRGVDISI EAGEFITIMG QSGSGKSTLL SVLGGMNHPT
SGEVEMAGVK LYQLPSEKLA DFRAQNLGFV FQSFHLIQYL TALENVMLPL AIVKMSTAAK
KDAARTALER VGLGGKADRL PNQLSGGEQE RVAIARAIVN NPHILLADEP TGNLDSKTSE
EVMALFRQLN EAGQTVVMVT HNPENGAYSD RTISLRDGLI SA
|
|---|
| |