Gene Gbem_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2131 
Symbol 
ID6782125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2478536 
End bp2480968 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content61% 
IMG OID642768126 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002138940 
Protein GI197118513 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0852026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCGG GCAACATCGG CAACGGGGGA AAAATGAACA ATCTGTCGGA AGTTGCGACC 
CCTGTCAACA GCAGGACGAA AAGAACTCCT ATTCCTTTTG CGGACCCCGC ATCCGCCCCA
CTCATGCAGC GGGAGCCTAT CCGCATCGAT TATGAGCAGG TGCTGCGCAC CATCTTCACA
ACGGCGCCCC TTGGCTTGTA CCAGACCGAC ATCGACGGCC GGAGAATCGC AGGTGTTGCA
GAGGATGGCG AGAACGAAGC GCTGATCGGC TTCATCCACC CCCAGGAGCG CAAGGAGCTC
ACGGCCAGCT GGCAGCAGAG CATGGAGAGC GGAGCCCAAT GGTCGCAACG CTTCAAGTAC
CGTTCAGCCG ACGGCAGGGT TTTCTGGCTG CATGCGGTGA TCGCCCAGGT GCGAAACAGC
CGGGGCGAAG TAACCGGCTA CCAGGGTTGC AACCTCGACA TCACAGCTGA AGTGCGCGTC
AACGAACAAC TGGCACTCAG CGAGGAGCGC CACCGTAAGG CGGTGGAGGC GGTGAGTGCG
GGAATCTGGG ATTTGGACGT CGCCACCAGC ACCTGCTTCT TCAGCCCCTT TTGCTACGAG
ATGCTCGGCT ACCGCCCCGG GCAGTCGCCG GTGAAACTGG AGGACTGGAG CTGCATCCTG
CACCCGGCAC AGTTGGAAGC CGCGCGCGCC CTCAAGGAAA GATGCGTAGA GGGGGCCGTG
GAGAATTTCG AATTCGAATT CCGCCTGAAG ACCAACGAGG GAAAATGGCG CTGGTTTCGC
TGTGAGGGGA AAGCGGCCGG CCGAGACGCA TCAGGTAGGG CAATCCGGCT GGCAGGGATA
TTGTGCGACA TCAACCAGGG CAAGATGATG GAACACCTGC TGCGCATGGA GCACGACCTG
CTGAACCTGA TCACCGCCAC GAGCCCCGTC GGTATCATGT TCATCGAACC CGGCGGCAAG
GTGGCCTTTG CCAATCCCCG CGCCGAACTT ATCCTCGGGC AGTCCAAGCA GGAGATGGCG
GCCAGAAACG ACGGCTCCCC GGTCTGGGGC ATCACCCGCG AACAAAGCCA AGGCAGCGTC
GCGCCCGACC TGTCGCTTGG GGAACTGCTG CGCGCAGGCG ATACCCTGTC GAACGCCTGC
TTCCGGTTCC TGCGCCCGGA CGGCGTAGCC GCGCTCCTCT CCATCAGCAC CGCCCCTTTC
CTGGATCAGG CCAGCAAGGT GAGCGGGACC GTGGTGACGC TCGAGGACGT TTCGGAACAA
AAGCAGCGCG AGCAGGTCAT GGCCGACAAC GACCGGTTGC TGCGCGAAAC CCAGAGAATC
GCCCAGTTGG GAAGCTACGT CCTCGATCTG GCCGGGGACC GCTGGAACTG CTCCAGCAAA
CTGGAGGAGA TCCTGGGAAT GGATCGAACC TTTCCCAGGA CCCTGCAGGG GCACTTCGAG
ATGGTCCACG ACGAGTACCG GCAGCTTTTC AAGGAAAGGT ACCTGGCCGC CATCGGCGAC
GGGCGCCCCT TCGAGATGGA ATACCCGATT CGCAGGCAAA GCGACGGCGT GGAACGCTGG
GTCACCGAGT GCTGCGAGCT TTCCGGGGTG GCCGCAGGGA AGCAGCAGCG GATGATCGGC
ACCATCAAGG ACATCACCGA GAGAAAGGAG GCCGAAGAGG CGATCAGGAA ACTGAACGAC
GAATTGGACC GGCGGGTGAT TGAAAGAACC TCACAGCTGG CGGTGGCAAA GCAGGAAATC
GAGTCCTTCA GCTATTCCGT TTCCCATGAC CTCCGAGCTC CGCTACGACA TATCAACAGC
TACAGTTCCA TCCTGATCGA GGAGCACGGC CACGCGCTCC CTGAGGAGGC TCACTACTAC
CTGGAGCGGA TCAGCACCGC CAGTTCCAGG ATGGGAAAGC AGATAGACGA CCTCTTGACC
CTCACCAGGG TGGGTAGAAC TTTGATGAAG CGCCAAACCT TCGACATCAG CCTTCTTGCG
GCGGAGGTAG CCGACATGCT GGCCGGGGAG GAGGGCTCGC AACCAGTCGA GTTCCTGATA
CAGAGAGGGC TGACTGCTTT CGGCGACAGC GTGCTGGTGC GCCTTGTTTT GCAGAACCTG
CTGGGCAATT CGATGAAGTA CGCCTCCCGG GTCCCCCGTC CGGTGATCGA GTTCGGCCAG
ATTCAGGGTC GCGGGCGCCA GACCTTCTTC GTAAAGGACA ACGGGGTCGG CTTCGACATG
GCCTACGTGG ACAAGCTCTT CCAACCGTTC CAACGCCTGC ACGGTTCCGA ATTCGAGGGA
ACCGGCATCG GGCTTGCCAC GGTGCGCCGC ATCATCGATC GCCACGGAGG GAGCATCTGG
GCCGAGGGGA TGGAGAACCG CGGCGCCACC TTCTATTTCA CCCTTTCCCA GCCGCGCAAA
AATGCTGCGC AACACGAGCC GGATTTAAGC TAA
 
Protein sequence
MRAGNIGNGG KMNNLSEVAT PVNSRTKRTP IPFADPASAP LMQREPIRID YEQVLRTIFT 
TAPLGLYQTD IDGRRIAGVA EDGENEALIG FIHPQERKEL TASWQQSMES GAQWSQRFKY
RSADGRVFWL HAVIAQVRNS RGEVTGYQGC NLDITAEVRV NEQLALSEER HRKAVEAVSA
GIWDLDVATS TCFFSPFCYE MLGYRPGQSP VKLEDWSCIL HPAQLEAARA LKERCVEGAV
ENFEFEFRLK TNEGKWRWFR CEGKAAGRDA SGRAIRLAGI LCDINQGKMM EHLLRMEHDL
LNLITATSPV GIMFIEPGGK VAFANPRAEL ILGQSKQEMA ARNDGSPVWG ITREQSQGSV
APDLSLGELL RAGDTLSNAC FRFLRPDGVA ALLSISTAPF LDQASKVSGT VVTLEDVSEQ
KQREQVMADN DRLLRETQRI AQLGSYVLDL AGDRWNCSSK LEEILGMDRT FPRTLQGHFE
MVHDEYRQLF KERYLAAIGD GRPFEMEYPI RRQSDGVERW VTECCELSGV AAGKQQRMIG
TIKDITERKE AEEAIRKLND ELDRRVIERT SQLAVAKQEI ESFSYSVSHD LRAPLRHINS
YSSILIEEHG HALPEEAHYY LERISTASSR MGKQIDDLLT LTRVGRTLMK RQTFDISLLA
AEVADMLAGE EGSQPVEFLI QRGLTAFGDS VLVRLVLQNL LGNSMKYASR VPRPVIEFGQ
IQGRGRQTFF VKDNGVGFDM AYVDKLFQPF QRLHGSEFEG TGIGLATVRR IIDRHGGSIW
AEGMENRGAT FYFTLSQPRK NAAQHEPDLS