Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2131 |
Symbol | |
ID | 6782125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2478536 |
End bp | 2480968 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768126 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002138940 |
Protein GI | 197118513 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0852026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCGG GCAACATCGG CAACGGGGGA AAAATGAACA ATCTGTCGGA AGTTGCGACC CCTGTCAACA GCAGGACGAA AAGAACTCCT ATTCCTTTTG CGGACCCCGC ATCCGCCCCA CTCATGCAGC GGGAGCCTAT CCGCATCGAT TATGAGCAGG TGCTGCGCAC CATCTTCACA ACGGCGCCCC TTGGCTTGTA CCAGACCGAC ATCGACGGCC GGAGAATCGC AGGTGTTGCA GAGGATGGCG AGAACGAAGC GCTGATCGGC TTCATCCACC CCCAGGAGCG CAAGGAGCTC ACGGCCAGCT GGCAGCAGAG CATGGAGAGC GGAGCCCAAT GGTCGCAACG CTTCAAGTAC CGTTCAGCCG ACGGCAGGGT TTTCTGGCTG CATGCGGTGA TCGCCCAGGT GCGAAACAGC CGGGGCGAAG TAACCGGCTA CCAGGGTTGC AACCTCGACA TCACAGCTGA AGTGCGCGTC AACGAACAAC TGGCACTCAG CGAGGAGCGC CACCGTAAGG CGGTGGAGGC GGTGAGTGCG GGAATCTGGG ATTTGGACGT CGCCACCAGC ACCTGCTTCT TCAGCCCCTT TTGCTACGAG ATGCTCGGCT ACCGCCCCGG GCAGTCGCCG GTGAAACTGG AGGACTGGAG CTGCATCCTG CACCCGGCAC AGTTGGAAGC CGCGCGCGCC CTCAAGGAAA GATGCGTAGA GGGGGCCGTG GAGAATTTCG AATTCGAATT CCGCCTGAAG ACCAACGAGG GAAAATGGCG CTGGTTTCGC TGTGAGGGGA AAGCGGCCGG CCGAGACGCA TCAGGTAGGG CAATCCGGCT GGCAGGGATA TTGTGCGACA TCAACCAGGG CAAGATGATG GAACACCTGC TGCGCATGGA GCACGACCTG CTGAACCTGA TCACCGCCAC GAGCCCCGTC GGTATCATGT TCATCGAACC CGGCGGCAAG GTGGCCTTTG CCAATCCCCG CGCCGAACTT ATCCTCGGGC AGTCCAAGCA GGAGATGGCG GCCAGAAACG ACGGCTCCCC GGTCTGGGGC ATCACCCGCG AACAAAGCCA AGGCAGCGTC GCGCCCGACC TGTCGCTTGG GGAACTGCTG CGCGCAGGCG ATACCCTGTC GAACGCCTGC TTCCGGTTCC TGCGCCCGGA CGGCGTAGCC GCGCTCCTCT CCATCAGCAC CGCCCCTTTC CTGGATCAGG CCAGCAAGGT GAGCGGGACC GTGGTGACGC TCGAGGACGT TTCGGAACAA AAGCAGCGCG AGCAGGTCAT GGCCGACAAC GACCGGTTGC TGCGCGAAAC CCAGAGAATC GCCCAGTTGG GAAGCTACGT CCTCGATCTG GCCGGGGACC GCTGGAACTG CTCCAGCAAA CTGGAGGAGA TCCTGGGAAT GGATCGAACC TTTCCCAGGA CCCTGCAGGG GCACTTCGAG ATGGTCCACG ACGAGTACCG GCAGCTTTTC AAGGAAAGGT ACCTGGCCGC CATCGGCGAC GGGCGCCCCT TCGAGATGGA ATACCCGATT CGCAGGCAAA GCGACGGCGT GGAACGCTGG GTCACCGAGT GCTGCGAGCT TTCCGGGGTG GCCGCAGGGA AGCAGCAGCG GATGATCGGC ACCATCAAGG ACATCACCGA GAGAAAGGAG GCCGAAGAGG CGATCAGGAA ACTGAACGAC GAATTGGACC GGCGGGTGAT TGAAAGAACC TCACAGCTGG CGGTGGCAAA GCAGGAAATC GAGTCCTTCA GCTATTCCGT TTCCCATGAC CTCCGAGCTC CGCTACGACA TATCAACAGC TACAGTTCCA TCCTGATCGA GGAGCACGGC CACGCGCTCC CTGAGGAGGC TCACTACTAC CTGGAGCGGA TCAGCACCGC CAGTTCCAGG ATGGGAAAGC AGATAGACGA CCTCTTGACC CTCACCAGGG TGGGTAGAAC TTTGATGAAG CGCCAAACCT TCGACATCAG CCTTCTTGCG GCGGAGGTAG CCGACATGCT GGCCGGGGAG GAGGGCTCGC AACCAGTCGA GTTCCTGATA CAGAGAGGGC TGACTGCTTT CGGCGACAGC GTGCTGGTGC GCCTTGTTTT GCAGAACCTG CTGGGCAATT CGATGAAGTA CGCCTCCCGG GTCCCCCGTC CGGTGATCGA GTTCGGCCAG ATTCAGGGTC GCGGGCGCCA GACCTTCTTC GTAAAGGACA ACGGGGTCGG CTTCGACATG GCCTACGTGG ACAAGCTCTT CCAACCGTTC CAACGCCTGC ACGGTTCCGA ATTCGAGGGA ACCGGCATCG GGCTTGCCAC GGTGCGCCGC ATCATCGATC GCCACGGAGG GAGCATCTGG GCCGAGGGGA TGGAGAACCG CGGCGCCACC TTCTATTTCA CCCTTTCCCA GCCGCGCAAA AATGCTGCGC AACACGAGCC GGATTTAAGC TAA
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Protein sequence | MRAGNIGNGG KMNNLSEVAT PVNSRTKRTP IPFADPASAP LMQREPIRID YEQVLRTIFT TAPLGLYQTD IDGRRIAGVA EDGENEALIG FIHPQERKEL TASWQQSMES GAQWSQRFKY RSADGRVFWL HAVIAQVRNS RGEVTGYQGC NLDITAEVRV NEQLALSEER HRKAVEAVSA GIWDLDVATS TCFFSPFCYE MLGYRPGQSP VKLEDWSCIL HPAQLEAARA LKERCVEGAV ENFEFEFRLK TNEGKWRWFR CEGKAAGRDA SGRAIRLAGI LCDINQGKMM EHLLRMEHDL LNLITATSPV GIMFIEPGGK VAFANPRAEL ILGQSKQEMA ARNDGSPVWG ITREQSQGSV APDLSLGELL RAGDTLSNAC FRFLRPDGVA ALLSISTAPF LDQASKVSGT VVTLEDVSEQ KQREQVMADN DRLLRETQRI AQLGSYVLDL AGDRWNCSSK LEEILGMDRT FPRTLQGHFE MVHDEYRQLF KERYLAAIGD GRPFEMEYPI RRQSDGVERW VTECCELSGV AAGKQQRMIG TIKDITERKE AEEAIRKLND ELDRRVIERT SQLAVAKQEI ESFSYSVSHD LRAPLRHINS YSSILIEEHG HALPEEAHYY LERISTASSR MGKQIDDLLT LTRVGRTLMK RQTFDISLLA AEVADMLAGE EGSQPVEFLI QRGLTAFGDS VLVRLVLQNL LGNSMKYASR VPRPVIEFGQ IQGRGRQTFF VKDNGVGFDM AYVDKLFQPF QRLHGSEFEG TGIGLATVRR IIDRHGGSIW AEGMENRGAT FYFTLSQPRK NAAQHEPDLS
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