Gene Gbem_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2109 
Symbol 
ID6782103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp2448845 
End bp2449525 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID642768104 
ProductABC transporter related protein 
Protein accessionYP_002138918 
Protein GI197118491 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCC TGCAAACCCA AGAGGTCAGC AAAAGCTACC GTATCGGAAA CCGCTTGATC 
AAGGTGCTCG ACTCCGTCTC GCTCTCGGTC GAGACCGGCG AGTTCCTGGT GGTGAAGGGG 
GAAAGCGGCA GCGGCAAATC GACGCTGCTC ACCATCCTTT CCGGGCTGGA CCGCCCGGAC 
CGGGGACGGG TCCTCATCGG CGGGGAAGAC ATCACCGACC TAGGCGAAGA CGCCCTGGCC 
CCCTTGAGAA ACAGCGCCTT CGGCTTCGTG TTCCAGTCCT TCCACTTGGT CCCCTCCTTA 
AACGCCCTGG AGAACGTGAT GTTTCCGGCC GAGCTCAAAG GCGATGCCGA AGCCCGCGCC 
AAGGCCGAAG CCCTTCTGGA AAGAGTCGGA CTATCCGGGA GACTCACAAG TTTCCCGCAC 
CAGCTCTCCG GCGGCGAAAA ACAGCGCTGC GCCATCTGCC GCGCCCTCAT CAACGACCCG 
CGCATCATCT TCGCCGACGA GCCGACCGGC AACCTCGATT CCATAAATGG CGCCGCCATC 
ATGGAGCTGC TCCTGGAACT GCAGCGCGAA CGCGGCACCA CCCTGATCCT TGTGACCCAC 
AGCCCCGAGA TCGCCCAGCG GGCGCATCGC GTGGTCACGC TCAAAGACGG CAGGATCGTC 
ACGGGGCGGG AGCATGGTTA A
 
Protein sequence
MTILQTQEVS KSYRIGNRLI KVLDSVSLSV ETGEFLVVKG ESGSGKSTLL TILSGLDRPD 
RGRVLIGGED ITDLGEDALA PLRNSAFGFV FQSFHLVPSL NALENVMFPA ELKGDAEARA 
KAEALLERVG LSGRLTSFPH QLSGGEKQRC AICRALINDP RIIFADEPTG NLDSINGAAI 
MELLLELQRE RGTTLILVTH SPEIAQRAHR VVTLKDGRIV TGREHG