| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2105 |
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| Symbol | |
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| ID | 6782099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2436199 |
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| End bp | 2443632 |
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| Gene Length | 7434 bp |
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| Protein Length | 2477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642768100 |
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| Product | polyketide-type polyunsaturated fatty acid synthase PfaA |
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| Protein accession | YP_002138914 |
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| Protein GI | 197118487 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAACTG ACGATCTGAA GCCGGCCGCC TCTAGTAACG GAACTCAGCT TGCCATCATC
GGCATCGGTT GCCTTTTTCC CAAGGCCGAG GACCGTGACG CCTACTGGGC CAACATCGCC
GATGGGATCG ACGCCATCAC TGAGGTCCCC GAGACCCACT GGCCGGTGGA CGCCTACTAC
GATGAGAACC AGAAGAGCCC GGACCGCACC TACGGCCGGC GGGGCGGTTT TCTCTCCCCC
GTCGACTTCA ATCCGATGGA GTTCAACATC CCTCCCAACG TCCTGGAGGC GATCGACACC
TCGCAGCTTT TGGGGCTCGT CGCTGCCGGC CAGGCGCTGA AGGACGCGGG GTACGGCCCC
GACCGCAGCT TCGACAAAAG CCGCGCTTCA GTCATCATCG GCGTAACCGG CACGCTGGAG
CTGGTGATAC CCCTCGGTGC ACGGCTCGGC CACCCGATCT GGCGCTCGGC CTTGAAGGAC
GCAGGCGTAG ACGAGGCGAC CGCCAACGAC GTCGTGGAGC GGATCTCCGA CTCCTACGTC
CCCTGGCAGG AAAACTCGTT CCCGGGTCTT TTAGGCAACG TGGTTGCCGG CCGCATCAGC
AAGCAGTACG ACCTGGGCGG GACCAACTGC GTCGTCGACG CGGCCTGCGC CAGCTCCTTC
AGCGCGTTGC ACCTCGCCTC CATGGAACTT GCCTCCGGCA AGTCCGACAT CGTGGTGACC
GGCGGCATCG ACACCTTCAA CGACATCTTC ATGTACATGT GCTTCAGCAA GACCCCCGCC
CTCTCCCCTA GCGGCAATGC GAAGCCATTC GACGTTTCCG CCGACGGGAC CATTCTCGGC
GAGGGGCTCG GGCTCGTGGT CATTAAGCGG TTGGCGGATG CCGAGCGCGA CGGCGACAGG
ATCTATGCTG TGGTGCGCGG CGTCGGTTCC TCCAGCGACG GCAAGGGTGA CGCGATCTAC
GCCCCTAGCG CCACCGGACA AAAGAACGCG CTCCTGAACG CCTACAAGAA CGCGGACGTC
ACCCCGCAGA GCATCGGCCT GATCGAGGCC CACGGCACCG GCACCAAGGT AGGGGACGCT
GTCGAAGTGA GTGCGCTGCG CGACGTATAC GGCGAGTCGA AGCTTCCCTG GTGCTGCCTC
GGCTCGGTCA AGTCCCAGAT CGGCCACACC AAGGCCGCCG CGGGTTCCGC CGGCCTCATC
AAGGCGGCGC TCGCGCTGCA CCACAAGGTG ATCCCCCCGA CCATCAAGGT GCAGACCCCG
CAAAAAGAGG TGGTCGGGGA GAAATCGCCC TTCTATCTCG CCAAGGAAAA ACGCCCCTGG
TTCCCGCGTG CCGACGTGCC GCGCCGCGCC GCCGTCAGCG CCTTCGGTTT CGGCGGCTCC
AACTTCCACG TGGTCCTTGA GGAGTACCAG GCCGACAAGA AGGCGGCCGA CTGGGACGGC
AACACCCAGA TCCTCGCCTT CTCCGGCGCC GACGCAGCAT CGCTTGCCGC CGGGCTCGAC
CGGGTGCCGG CGGCTGCAGC CTGGAGCGCC GTCAGGGAGC TGGCATTCCA GACCCGCGCG
AGCTTCGACG CCATGGGAAC CCTTCGCCTT GCCCTGGTGA TCGAGCGCGG AAAAACCAAC
GTCGCCTCGC TGGTGAAGAA CGCCAAGTCC ATGCTGGAGA AGAACTCGAA ATCCGCCTGG
CAGACCCCCG ACGGTGCCTT CTTCGGCTGC GGCGCAGCCG GCAAGCTCGG CGTGCTCTTC
CCGGGGCAGG GCTCCCAGTA CACCGGGATG CTGAACGATC TCGCCTGCCG CTTCCCGCAG
CTACTGGACG CGGTCACCGC TGCTAACGAC GGTTTCACTT CCGCCGGTGG CAGGAGGCTT
TCCGACCTCA TCTACCCCCC CTCCGCTTTC GACGATACGA CCCGTAACAG CCAGGAAGAG
GCCCTGCGGG CGACCCAGGC GGCGCAACCT GCCATCGGTG CCGTGAGCCT CGGCGCGCTG
CGCCTTTTGC AGTCATTCGG CCTTGATCCT GAAGGTGTCG CCGGCCACAG CTACGGCGAG
CTGACCGCCC TTTGCGCCGC AGGCCGGCTG GACGAGAGCG CACTGCACGC CCTGTCGCGC
CTGCGCGGCG AGCTGATGGG CGCCGGCAAA GGGGACAAGG GGAGCATGCT GGCCGTCTCA
GCACCGCTGG CGAAGATTGC CGAGGTGGTA GCTGCAGAGA AACTGGACCT GGTGATCGCC
AACAAGAACG CCCCCTCACA GGCGGTCCTC TCCGGCGCCA GCGCCGAGAT AAAGCGCGCC
GTCGAGATCT TCAAGGGGCG CGGACTCACC TGCAAGGAGC TTCCGGTCGC AGCCGCTTTC
CATAGCGCGC TTGTGTCCGA CGCCGCCACG CCGTTTTTGG CCGCGCTCGC CAAGATCGAG
ATGCCGAAGG CGAAGATCCC GGTCTACGCC AACACCACGG CCGCGGTCTA CCCTGCCGAC
CCCGCAGCCG CCAAGGCACA ACTCGCTTCC CAGCTCGCCA TGCCTGTCGA TTTCGTGGCG
GAGATCGAGG CTATGTACGC GGCTGGCATC ACCAGCTTCG TCGAAGTCGG CCCCGGCAAC
AGGCTGACCG GGCTCGTGCA GGCCATCCTC GCCGACCGGC CGCACGCAGC CGTCGCCCTC
GACTCGTCAT CGGGCAAGCG CGCGGGCATT GCCGACCTGG GCCGCACCCT GGCGCAACTG
GCAGTGCTCG GCTTCGGCGT GAAGCTCGCC ACCTGGGACG AGGGATATCG TCCGGCTCCC
GCAGGTAAGA AGCCGCTCTT GAGCATTCCC ATCTGCGGCG CCAACTACAG CAAGCCGAAG
CCGAAGAAGC CGCCGGTACA GCCGAAACCG GCAGCGGTGG CAGCACCAGC TGCTCCGCAG
GCGGCACCAG TAGCCATGAA CGCGCCGGCT GCACAGCAAC CGGCCTACCA GGCAGCACCG
GCTTCTCCCC GAGAAGCTTC CTTCCAGGCC GCTCCGGCCG CAGCGGCGCC GCAGGCGGCG
CTTGGCGAAT CTTTGCGCCT GGCGCGCGAA GGGATGGCGG TCCTCCAGCG GATGCAGGAG
GATACCGCGC AGTTGCACCG CCGCTTCCTC GAAGGGCAGG AGACCGCAAC CAGAACCTTC
CAGACCCTGC TCCAGCAGCA GCAACAGTTG ATCCTGGGCA CCAACCTTTC CCCCGCCGCA
GTGGCTCCGG CGACCGTACC GGTCCAGGCG CAGGCCCCCT CGTACGTCGC TCCGGCAACG
ATGGCTGCAC CCGCCGCCCC GGCTGTCTCT GCACCAGTGG CTAAGGCCGC GCCCGTCGCC
GCCGCACCGG CAGTCGCCCC TGCGCCTGTG CCGGCGGCAG CCGCTGCTCC CGCTTCCGCT
GCCGCCGACT CGGCGCGCAT CACGCAAGTG CTCCTGGCGG TGATCGCCGA GAAGACCGGG
TACCCGGTCG AGATGCTGGA ACTCGACATG GGGATGGATT CGGATCTCGG GATAGATTCG
ATCAAGCGCG TCGAGATCCT CTCCACGCTG CAGGAGCGCC TCCCGGGGAC TCCGGTCATC
GGCCCCGAGC ACCTCGGCAC GTTGCGCACC CTCGGCGACA TCGCAGGCCA CCTCTGCGCT
TCGACAGGTT CCGCGGCCCC GGCGGCGGCA GCCGTACCCG CAGCAACAGC TGCGCCCGCC
GCCGCTACTT CCGAGCTCGC AGCCGAGCAG ATCACCAGCA CCCTCTTGGC CGTAGTCGCC
GAGAAGACAG GCTATCCCGT CGAGATGCTT GAATTCGACA TGGGTATGGA CTCGGACCTC
GGGATCGATT CGATAAAACG GGTCGAGATA CTCTCCACCC TTCAGGAGCG CCTCCCCGGC
TCCCCCGCGA TAGGCCCCGA GCACCTGGGG ACCCTGCGCA CCCTGGGGGA CATCGCCGGG
TTCCTCTCCG CCTGTTCGGC TTCGGCCGCA CCCGCTAGCG CAGGGGGACA GGCACCTGAC
GGAGCCAGTC CCCTTGCCGC ACCGGCTCAG CTCGCAACAC CCCAGACCGC AGCAATCGCC
GCCGGCGAGG TCACCAGCAC CCTTCTGGCC GTAGTCGCCG AAAAGACCGG CTACCCGGTG
GAGATGCTGG AACTCGACAT GGGAATGGAC AGCGACCTCG GCATCGACTC CATCAAACGG
GTCGAGATCC TCTCCACGCT GCAGGAGCGT CTCCCCGGCA CCCCGGCCAT TGGCCCGGAG
CACCTGGGGA CCCTGCGCAC CCTGGGGGAC ATCGCAAGCT TCCTCGCTGC CGGATCGGCT
TCGGCCGCAC TCGCCGGCGA AGGGGGACAG GCACCTGACG GAGCCAGTCC CCTTGCCGCA
GCAGTCCCGG CTGAAGAGAT CACCGCCACC CTGCTCTCCG TCGTCGCCGA AAAAACCGGC
TATCCGGTGG AAATGCTAGA GCTTGAGATG GGGATGGACA GCGACCTCGG CATCGACTCC
ATCAAGCGCG TCGAGATCCT CTCCACGCTG CAGGAGCGCC TCCCCGGCAC CCCGGCCATA
GGCCCCGAAC ACCTGGGAAC CCTGCGTACG CTCGGCGACA TCGCAAGCTT CCTCGCTGCC
GGTTCGGCCT CGGCCGCACC CGCCAGCGAA GGGGGACACG GCGAAGGGGG ACAGGCACCT
GACGGAGCCA GTCCCCTTGC CGCCGCATCC AGCGACCCCG CTCGTATCAT GCAGACCCTG
CTTGAGGTAG TCGCCGACAA GACCGGCTAC CCCGTGGAGA TGCTGGAGCC GGGAATGGGT
ATGGACAGCG ACCTCGGCAT CGACTCCATC AAGCGCGTCG AAATCCTCTC CACGCTGCAG
GAGCGCCTGC CCGAGACTCC GTCCATTGGC CCCGAGCATC TGGGAACCCT GCGCACCTTG
GGCGACATAG CAAGCTTCCT CTCTGCCGGT TCGGCTTCGG CCGCGCCCGC CAGCGAAGGG
GGACAGGCAC CTGGCGGAGC CAGTCCCCTT GCCGCTCCGG CATCCGCATC GGCTCAGCCC
GTCGCAGCCC CTGCCTACGA GGCAAGCCAG GCGGTCGCCG CGGAACCGGT ACCTGCACCG
GCCCAGGCGA TCCAGAGAAG CTCCGTCACT GCTGTAGAGC TTGCCGCTGA CGACGAGGGC
GAGGCCATCG TCCTTGCCAA CGACGGCGAG ATCTGGGTCA CCGACGACGG CTCGGCGTTT
GCCTCCGAGC TTTGCAGCAT TCTCCTGGAG CACGGCTGCA CGGTGCGCAA GGTCAACGCG
GCCCAGGCCC AGCAGACAGC GCCAGCCGGG AAACTCTCAG GCCTGGTGAT CTGCGCGCCC
ACCGCAGGCA CCGACGACCT ATTCCTGGAA AACGCCTTCC AGCTGGTCAA GAACGCCGCC
GGCGCCCTGA ACGAGTCGGC TAACGCCGAA GGGGCCGTCT GCGTCACCGT CTCCCGACTG
GACGGGGCCT TTGGTTTCGG CTCCGGCAAG AGCATCAAGG ATGCGCTCTC CGGCGGACTG
GCGGGGCTCG CCAAGACGGC GGCGCTGGAA TGGCCGGAAG TCTCCTGCAA AGCGATCGAC
CTGGGCGAGT TCCCTCACGC GGCTGCCGCC GCCAGCGCCG TCGCCATCGA GATGCTGCGC
CGCGGCCCGG TTGAGGTAGG TCTCTCCAGC AAAGGGCGCT TCGCGCTGCA AACCGTTGTG
CTTCCCTCCG CACCGGCTCC GGCAGAACCC GCTATCAAGG CCGGCGACGT AGTGGTAATC
ACCGGGGGCG GGCGCGGCGT GACCGCGGTC TCCGCCCTTG CGCTCGCCAA GGAGTACAAG
CCGTTCCTGG TGCTCCTGGG GCGCAGCTCC GAACCCGAGG ATGAGCCCGC CTGGCTTGCC
GGCGTCTCCG AAGAAGCCGA GATCAAGCGC GCCATCATGC AGAACGCGGT GGGCAAACTC
CACCCGCGCG AGATCGAGGA GCGCTACCGG GCCGTCATGG CCGGGCGCGA ACTTAGCGAC
ACCCTGCAGA AGATCTCCGC CACCGGCGCC GAGGCGATCT ATCGCTCGGT CGACATCCGA
GACCGCAGCG CCATGGAACT CCTCCTGGGC GAAATCCGCC GCGCCCATGG CCCGATCCGC
GGCGTGGTCC ACGGCGCCGG CGTCCTCGCC GACCGCCTTA TCGTCGACAA GACGCCCGAG
CAGTTCGAGC AGGTCTACAG CACCAAGGTC GAAGGGCTGC GCGCGCTCCT GCACGCGACC
CGCAACGACG AGCTTCGCTT CATCGCCCTC TTCTCCTCCT CCACCGGCCG CTTCGGCCGC
GTGGGCCAGG TTGATTACGC GGTCGCCAAC GAGATCCTCA ACAAGGTGGC CCAGGCCGAG
GCGCGCCGCC GCGGCGGCTG CCGCAGCGTC AGCATCAACT GGGGTCCCTG GGACGGCGGC
ATGGTCACCC CGGCACTCAA GAAGGTCTTT GCAGCCGAGG GGATCGGCGT GATCGACCTC
ACCGAAGGCG GCGACTTCCT CGCCAGAGAA ATCTCCGCTG CCGGCGCGCC GGTCGAGATC
GTAGCCATCG CCCAGCTCCC CGAGCAGAAG GGAGCAGCCG CCCCGGCCTC CTCCGCGGCG
AAGCCCGAGA ACCTCTCCGA GGCGTTCGCG CTGACCCTGA CCGTCCCGGA ATTCCCGTTC
CTGCGCTCGC ACGTTTTGGA CGGGAAAGCG GTGGTCCCCA TGGCGGTCAT CGTGGAATGG
CTCGCCCACG GCGCGCTCCA CGGCAACCCC GGTTTCCGTT TCCACGGCTT CAACGATCTT
CGCATCTGCA AAGGGGTGGT CTTCGAGGAC AACACCTCGT TCCCCTTGAG CGTGCTGGCC
GGGCGCGCCG TGAAGAAGGA ATCGTTCTGG CTGGTGCCGG TCGAGCTCTC CAGCCCCGGC
GTCAACGGCA GGACCATACT CCACGCCCGC GCCCAGATCG TCCTCGCCAC CAAACACGTG
GAGGGTATCC GCTCCATCAC CGAGATACCG GCCACCGCCT ACGCGCCGCA CGACGGGGTC
ATCTACAACA ACGAGCGCCT CTTCCACGGC CCCGACCTGC ACGGCATCGA GCACGTCGAC
GGCTGCTCCG CCAAGGGAAT CGCTGCCTCG GTTAAGGGCG CGCCCGCGCC GGGCAAATGG
ATCCGCCGCC CCTTGAGGAG CGCCTGGCTC ACCGATCCGC TGGTCGTGGA CAGCGCCTTC
CAGATGATGA TCCTCTGGAG CTTCGAGCGC TTCGGCGCCG GATCGCTCCC CTGCTTCGCC
GGGCGCTACC GCCAGTTCCA GGAATCCTTC CCGAAGGAAG GGGCCCAGGT GGTGATCCGC
GTCACCTCCG AGAACCCGCG CGGCGCCAGC GCCGACATGG AGTTCCTGGA CCGCAACACC
GGCAAGCTCG TAGCGCGCCT GGAGGGATAC GAGTGCGTCA TCGACCCGTC CCTCAAGCAG
GCCTTCCAGC GTAACAAGCT GCGGACCGTT TCCGTTGCAT TGGGGGCGGC ATAG
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| Protein sequence | MKTDDLKPAA SSNGTQLAII GIGCLFPKAE DRDAYWANIA DGIDAITEVP ETHWPVDAYY
DENQKSPDRT YGRRGGFLSP VDFNPMEFNI PPNVLEAIDT SQLLGLVAAG QALKDAGYGP
DRSFDKSRAS VIIGVTGTLE LVIPLGARLG HPIWRSALKD AGVDEATAND VVERISDSYV
PWQENSFPGL LGNVVAGRIS KQYDLGGTNC VVDAACASSF SALHLASMEL ASGKSDIVVT
GGIDTFNDIF MYMCFSKTPA LSPSGNAKPF DVSADGTILG EGLGLVVIKR LADAERDGDR
IYAVVRGVGS SSDGKGDAIY APSATGQKNA LLNAYKNADV TPQSIGLIEA HGTGTKVGDA
VEVSALRDVY GESKLPWCCL GSVKSQIGHT KAAAGSAGLI KAALALHHKV IPPTIKVQTP
QKEVVGEKSP FYLAKEKRPW FPRADVPRRA AVSAFGFGGS NFHVVLEEYQ ADKKAADWDG
NTQILAFSGA DAASLAAGLD RVPAAAAWSA VRELAFQTRA SFDAMGTLRL ALVIERGKTN
VASLVKNAKS MLEKNSKSAW QTPDGAFFGC GAAGKLGVLF PGQGSQYTGM LNDLACRFPQ
LLDAVTAAND GFTSAGGRRL SDLIYPPSAF DDTTRNSQEE ALRATQAAQP AIGAVSLGAL
RLLQSFGLDP EGVAGHSYGE LTALCAAGRL DESALHALSR LRGELMGAGK GDKGSMLAVS
APLAKIAEVV AAEKLDLVIA NKNAPSQAVL SGASAEIKRA VEIFKGRGLT CKELPVAAAF
HSALVSDAAT PFLAALAKIE MPKAKIPVYA NTTAAVYPAD PAAAKAQLAS QLAMPVDFVA
EIEAMYAAGI TSFVEVGPGN RLTGLVQAIL ADRPHAAVAL DSSSGKRAGI ADLGRTLAQL
AVLGFGVKLA TWDEGYRPAP AGKKPLLSIP ICGANYSKPK PKKPPVQPKP AAVAAPAAPQ
AAPVAMNAPA AQQPAYQAAP ASPREASFQA APAAAAPQAA LGESLRLARE GMAVLQRMQE
DTAQLHRRFL EGQETATRTF QTLLQQQQQL ILGTNLSPAA VAPATVPVQA QAPSYVAPAT
MAAPAAPAVS APVAKAAPVA AAPAVAPAPV PAAAAAPASA AADSARITQV LLAVIAEKTG
YPVEMLELDM GMDSDLGIDS IKRVEILSTL QERLPGTPVI GPEHLGTLRT LGDIAGHLCA
STGSAAPAAA AVPAATAAPA AATSELAAEQ ITSTLLAVVA EKTGYPVEML EFDMGMDSDL
GIDSIKRVEI LSTLQERLPG SPAIGPEHLG TLRTLGDIAG FLSACSASAA PASAGGQAPD
GASPLAAPAQ LATPQTAAIA AGEVTSTLLA VVAEKTGYPV EMLELDMGMD SDLGIDSIKR
VEILSTLQER LPGTPAIGPE HLGTLRTLGD IASFLAAGSA SAALAGEGGQ APDGASPLAA
AVPAEEITAT LLSVVAEKTG YPVEMLELEM GMDSDLGIDS IKRVEILSTL QERLPGTPAI
GPEHLGTLRT LGDIASFLAA GSASAAPASE GGHGEGGQAP DGASPLAAAS SDPARIMQTL
LEVVADKTGY PVEMLEPGMG MDSDLGIDSI KRVEILSTLQ ERLPETPSIG PEHLGTLRTL
GDIASFLSAG SASAAPASEG GQAPGGASPL AAPASASAQP VAAPAYEASQ AVAAEPVPAP
AQAIQRSSVT AVELAADDEG EAIVLANDGE IWVTDDGSAF ASELCSILLE HGCTVRKVNA
AQAQQTAPAG KLSGLVICAP TAGTDDLFLE NAFQLVKNAA GALNESANAE GAVCVTVSRL
DGAFGFGSGK SIKDALSGGL AGLAKTAALE WPEVSCKAID LGEFPHAAAA ASAVAIEMLR
RGPVEVGLSS KGRFALQTVV LPSAPAPAEP AIKAGDVVVI TGGGRGVTAV SALALAKEYK
PFLVLLGRSS EPEDEPAWLA GVSEEAEIKR AIMQNAVGKL HPREIEERYR AVMAGRELSD
TLQKISATGA EAIYRSVDIR DRSAMELLLG EIRRAHGPIR GVVHGAGVLA DRLIVDKTPE
QFEQVYSTKV EGLRALLHAT RNDELRFIAL FSSSTGRFGR VGQVDYAVAN EILNKVAQAE
ARRRGGCRSV SINWGPWDGG MVTPALKKVF AAEGIGVIDL TEGGDFLARE ISAAGAPVEI
VAIAQLPEQK GAAAPASSAA KPENLSEAFA LTLTVPEFPF LRSHVLDGKA VVPMAVIVEW
LAHGALHGNP GFRFHGFNDL RICKGVVFED NTSFPLSVLA GRAVKKESFW LVPVELSSPG
VNGRTILHAR AQIVLATKHV EGIRSITEIP ATAYAPHDGV IYNNERLFHG PDLHGIEHVD
GCSAKGIAAS VKGAPAPGKW IRRPLRSAWL TDPLVVDSAF QMMILWSFER FGAGSLPCFA
GRYRQFQESF PKEGAQVVIR VTSENPRGAS ADMEFLDRNT GKLVARLEGY ECVIDPSLKQ
AFQRNKLRTV SVALGAA
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