Gene Gbem_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2093 
Symbol 
ID6782087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp2420361 
End bp2421035 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content58% 
IMG OID642768088 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_002138902 
Protein GI197118475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000603573 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGT TCGCCGCATT GCTAATCGGT TCCGCCCTCA CCTCCCTCAT CGCCAGTCAC 
GGTTTTGCCG CGGATGCTCA ACCGTCAGCC GCAGCACCAG CGAAACAGGC GCCAGCAGAA 
ACAGCGGCGA CTACAGCTCC CGCAACTCCG GCGGCGCCCG CAGCGCAACC CCCTGCGGCT 
AAAGACGAGA AAATAGCCCA GGCTCCCACT GCTGGAAAAG AGGTGAAGGT CGGCTTCATA 
ACCCTGAACA AAGTTGCCTC CGAAACCGCA GAGGGGAAGG CCGCCACTGG CAAGCTGAGC 
GTACGGTCTG CCAAGCTGCG CGAAAAAATC GACGCAAAGC AGAAGCAGCT TGAGAAGCAA 
AAGGCCGCAA TAGAGTCGAA GCTTCCCACC ATGACCCCGA AAGAGCGCCA GACCAAGGGG 
ACGGAATTCC AGAAAAAGGT CGAGGACTTC CAGAAGATGG TGCGCGCGAG CGAGTCGGAA 
ATGGCGGAAA TGCAGGAAAA ACTGACCAGC CAGGTCTATG CGCAGATTAA AGAAGCCGCG 
ACCGCTTACG GCAAGGCCAA CGGTTTCGCC ATTGTGGTTG AAGAAAAGGC GGTGCTCTAC 
CTGGCGGAAG AGCTGAAACC CAAGGACCTG ACGGCCGAGA TCATCCAGTA CATGGACAAG 
AAACCGGCGA AGTAA
 
Protein sequence
MNRFAALLIG SALTSLIASH GFAADAQPSA AAPAKQAPAE TAATTAPATP AAPAAQPPAA 
KDEKIAQAPT AGKEVKVGFI TLNKVASETA EGKAATGKLS VRSAKLREKI DAKQKQLEKQ 
KAAIESKLPT MTPKERQTKG TEFQKKVEDF QKMVRASESE MAEMQEKLTS QVYAQIKEAA 
TAYGKANGFA IVVEEKAVLY LAEELKPKDL TAEIIQYMDK KPAK