Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2069 |
Symbol | |
ID | 6782063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2387736 |
End bp | 2391290 |
Gene Length | 3555 bp |
Protein Length | 1184 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768064 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002138878 |
Protein GI | 197118451 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGTG CTGGGCACTG GCAGGCGTAT TTTAGGAGGG CGGTGCTGCC GCTGGCGGCC TGGACCGTTT TTATCGCACT CCTTGCCGGC ACCAGCATCT TCTTGCACCA TCAGGACTCG CTGAAGGAGG CGGAGAACGA GGCGCGCGAT TACTTCCGCC TCAACATGGC CTACCGAGCC TGGGGATCGT CGGTGGGAGG AGTCTACATA TTAAAGGACA AGGTTCTCCC TAACCCCTAC CTCAAGGTGC CGAAGCGCGA TGTCGCCACC ACAGACGGCA TCCACCTCAC CCTGGTCAAC CCCGCTTACA TGACCCGCCT GGTCTTCGAC GGCATCGCGA AGGCAACCCC CACTCCCGTC ATCAACCGGA TAGTGAGCCT GAAGCCGCTT AACCCCAAAA ACACGCCTGA CGCCTGGGAG CGGGAATCCT TGATGCGGTT CGAAGAGGGG AGCGCACTGG AGCGATCCCA GGCCACCGAC ATCAAGGGCA AACCCTACCT GCGTTTCATC TCCGCCTTCA TTGCCGACGA GTCCTGCCTC AAATGCCATA GCGGCCAAGG TTACAAAAAA AGGGACCTGC TGGGCGGCAT CGTCATCTCC ATACCTCTGG AGGGATATTT CAAGTCCGAC ATCCAGACCA GGAAGGCCTT TTCGGCCGCT TACTTTTTGC TTTGGGCTGT GGGGGGCGGA GGGATCCTGG TATCGGCGCG GCGCCGGCAC GATTACGAGG AGGAACTGCG CGCCGGGGAG GAAAAATTCC GCACCGTTTG CGACTGGACC CAGGATTGGG AGTACTGGAT CGACCAGGAA AGGAGGATGC GCTACGTCTC TCCCTCTTGC TTCGACATCA CCGGTTATGC CCCGCAAGAG TTCATGGAGG ACCCGGAACT GGCGCAGCGC CTGGTTTATC CCGAAGACAG GGAAGCTTTC GCAAATCACC TTGAACAGGG CGCGGCGGGG TCGCCTCCGG ACTCCATCGA GTTCCGCATC GCCACCAAAA GCGGCGCTGT CCGCTGGATC CACCATGACT GCCGCCCCGT CTTTTCCAAC GGGAATTTCC TGGGGCGCCG CGTCTCCAAC CGGGACGTAA CCGACCGCAA GATCGTGGAA CAGGAACTTG CCATCCGCGC CGAACTCCTG AACTGCGTCA GCGATTCCGT CTTCGTGGTG AGCCTTGGGG GGACGATCCT GGAGGTCAAC GACGCCGCCT GGCGTACCCG TGGTTTCAGC CGGGAGGAAA TGCTGGCGAT GAACATCTGC GACCTGGTGA GCCAGCGGTA TGCCAAGCTC TTCCCGGAGC ATCTGCGCCT GGTCGCGCAG CACAGCGAAG GTTTCCTGGA ATCGGAGCAT CGTTTGAAGG ACGGCCGGGT GATCTCGGTG GAGATCGACA GCCGCATCAT CGAGTACCGC GGGGAGAGCG CCGTACTGAG CAGCGTGCGC GACGTCACCG AACGCAAGGA GACCGTGCAG ATATTGCGAC GGTCCGAGCG CTTCAACGTG TCGCTGAACC GGATCTCCCA GGCTTTCTTG ACCAGCAGCG AAGAGCAGCA GATGTACCAG GAACTCCTGG TGGCGCTGCT CGAGGTTATG GACAGCCCGT ACGGCGTGGT GGGATATCTG GACGACGCCG GAGACCTGGT TTTGGCTGCA GTCTCGGTGG ACAGGGGCGG CCCGAAGGCC GCCCACATTG TGATTCCGGA GGCTCGTTGG GGGGAGACGC TCTGGGGGCT CACGTTGCGC AGCGGCGAAG CGCGCTACTC CAACCAGCCG CAGAACCCGC CCGCCTGGCA CTTCCATGTA GAGCGCCTCC TCATGGCCCC CTTGGTCTAC CAAGGCAAGC CGAGCGCGCT TTTGATGGTC GCCAACCGCC CCGGCGATTA CACCGATGAG GACCTGCAGA TGCTGCAGGG GATAGGGGCG CAGATCGCGC CGGTGCTGAA TGCGAGGCTC GACCAGCAGC AGGCGGTAGC CGCGTTGCGC GAGAACGAGA GCAAGCTGCA GATCATCTTC GACGTGATCC AGGCAGGCGT GATCCAGGCC GACTCTACAG GGAGCGTGAT TTACGCAAAC CAGCGCATGG CAGAGATGTT CGGGATGCCT ATGGAGGAAC TGATCGGCTC CGATTACTGC AGTCACGTCT CACCGGAGCA GCGTCAGTTG GCCGGGTCAT CATTTGCCAT GCTTTTGAGC GGCGAGCTGG AGTCGGCTCA CTACGAGAGA CATTACCGGC GCAAGGACGG CACCTTGTTC TGGGGGTATC TGACCGGGCG CAGGCTGGTC GCTTCCGACG GCAAGCCGGC CGAACTGGTC GCCACCATCA CCGACATGAC CGATCTCAAG TCCGCCGAAG AGAAGCGCCA CAGAAGCGAG CAGCAGATGC TCCACGTTCA AAAACTGGAG AGCCTCGGCG TTTTGGCCGG CGGCATAGCA CACGACTTCA ACAACATCCT TCTAGCCATC ATGGGGAACA CGAGCCTCGC CCTGCAGCGC GTGGATCGGG GCTCGCCCCT GGAGCAGCAC CTGCTGCAGA TCGAGAAGGC TTCCGAGAAG GCCGCCGATC TGGCGCGCCA GATGCTGGCC TACTCCGGTA AGGGGCGCTT CGTCCTGGAG GCGCTGGACC TGAACCGGCT GGTTCGCGAG ATGACCTCCA TGCTGGAGGT GTCGCTCAGC AAGAAGGCTG TGCTCCGTTT CCACCTGGCC GAGGAGTTGC CGGGGATCAT CGCGGACCCG ACCCAGATCC GGCAGATCAT CATGAACCTC GCCATCAACG CCTCGGAGGC AATAGGGGAG AAGAGCGGGG AAATCACCAT AGCGACCGGT TCCCTGATAT GCGACAGCCA CTACCTTGCC GAAAACTGGC TGGACGTGCC CCTCCACGAG GGGCGTTACG TCTATCTGGA GGTGACCGAC AACGGCTGCG GCATGACCAA GGAAACGTTG GACAGGATCT TCGAACCGTT TTTCACCACC AAGTTCACCG GGCGCGGGCT CGGCATGGCG GCCATACTCG GCATCGTGCG CGGGCACAAA GGAGTCATCA AGGTCTACAG CGAGCCGGAT ACGGGAAGCA GCTTCAAGAT CCTGCTTCCC GCCACCGAGG CCGCAGTGCT CCCCACCGCC GCAGTCAACA TGGCGGATGG ATGGAGGGGG TCGGGCAGCG TGCTCCTGGT CGACGACGAG GAGAGCGTGC GCGACGTGGC GAGCGCGATG CTGCACGAAC TGGGCTTTGA GGTCATCTCT GCAGCGGACG GAAGGCAAGC GCTGGAGCTG TACCGCCGCC ACGGGGAGGG GATAACCGTT GTCCTGATGG ATCTGAACAT GCCCAACCTG AGCGGCGAAG AGGCCTTCCA CGAACTGCGC AAGATGGACG CGGAGGTGCG AGTAATCCTC TCCAGCGGTT TCAGCGAACA GGAGGTAACC CGCAAATTCC TGGGCAAAGG GCTTGAGGGA TTCGTTCAGA AGCCTTATAC GCTCGCCGCG CTGCGAGCAG TGATGAGTCA GGCGCTGTCG AAGAAGGGTT CCAGCTCTCC CAAGGGCACG CAAAACGGCC AGTAG
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Protein sequence | MKCAGHWQAY FRRAVLPLAA WTVFIALLAG TSIFLHHQDS LKEAENEARD YFRLNMAYRA WGSSVGGVYI LKDKVLPNPY LKVPKRDVAT TDGIHLTLVN PAYMTRLVFD GIAKATPTPV INRIVSLKPL NPKNTPDAWE RESLMRFEEG SALERSQATD IKGKPYLRFI SAFIADESCL KCHSGQGYKK RDLLGGIVIS IPLEGYFKSD IQTRKAFSAA YFLLWAVGGG GILVSARRRH DYEEELRAGE EKFRTVCDWT QDWEYWIDQE RRMRYVSPSC FDITGYAPQE FMEDPELAQR LVYPEDREAF ANHLEQGAAG SPPDSIEFRI ATKSGAVRWI HHDCRPVFSN GNFLGRRVSN RDVTDRKIVE QELAIRAELL NCVSDSVFVV SLGGTILEVN DAAWRTRGFS REEMLAMNIC DLVSQRYAKL FPEHLRLVAQ HSEGFLESEH RLKDGRVISV EIDSRIIEYR GESAVLSSVR DVTERKETVQ ILRRSERFNV SLNRISQAFL TSSEEQQMYQ ELLVALLEVM DSPYGVVGYL DDAGDLVLAA VSVDRGGPKA AHIVIPEARW GETLWGLTLR SGEARYSNQP QNPPAWHFHV ERLLMAPLVY QGKPSALLMV ANRPGDYTDE DLQMLQGIGA QIAPVLNARL DQQQAVAALR ENESKLQIIF DVIQAGVIQA DSTGSVIYAN QRMAEMFGMP MEELIGSDYC SHVSPEQRQL AGSSFAMLLS GELESAHYER HYRRKDGTLF WGYLTGRRLV ASDGKPAELV ATITDMTDLK SAEEKRHRSE QQMLHVQKLE SLGVLAGGIA HDFNNILLAI MGNTSLALQR VDRGSPLEQH LLQIEKASEK AADLARQMLA YSGKGRFVLE ALDLNRLVRE MTSMLEVSLS KKAVLRFHLA EELPGIIADP TQIRQIIMNL AINASEAIGE KSGEITIATG SLICDSHYLA ENWLDVPLHE GRYVYLEVTD NGCGMTKETL DRIFEPFFTT KFTGRGLGMA AILGIVRGHK GVIKVYSEPD TGSSFKILLP ATEAAVLPTA AVNMADGWRG SGSVLLVDDE ESVRDVASAM LHELGFEVIS AADGRQALEL YRRHGEGITV VLMDLNMPNL SGEEAFHELR KMDAEVRVIL SSGFSEQEVT RKFLGKGLEG FVQKPYTLAA LRAVMSQALS KKGSSSPKGT QNGQ
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