| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2062 |
|---|
| Symbol | |
|---|
| ID | 6782056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2375473 |
|---|
| End bp | 2376375 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768057 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_002138871 |
|---|
| Protein GI | 197118444 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACA CCGTAGCCGC CATCGACCTT GGCACCAATA CCGCGAGGCT GCTCATCGCC
GGCCGTGACC CCTACCGCCA GATACTTTTG AAACGGATCA TCACCAGGCT CGGGGGGGGC
TTTACCCGTG AGCGCGGACT CTCCGAGGAG GCGCAGCTTC GTTCCATCGC CGCCTTGAAG
GAGTTCGCGC TCGACATGTC GCACCACGGC GTGGTCCGGC TGCGGGCGGT TACCACCAGC
GCCGTTAGGG ACGCGAAAAA CGGTGAAGAG TTCGTGCAAA GGGTGCTTGC CGAGACCGGC
ATCGCTTTGG AGGTGATCGA CGGCACGGAG GAGGCGGTGC TGACGCTGAG AGGGGTGGGC
TCGATCCTGG ATCGCAAGGA ATGCGACCTG GCAGTCTTCG ACGTGGGAGG CGGGAGCACC
GAGTACACCC TCGCCTCTGA CCTGCAGCCG GTATTCTCCC GCAGCCTCCC TATCGGCGTG
GTCAGGCTCA CCGAAGGGAA GGCCGGGGTC GTAGAGATGG AGGACAAGAT CAGTCGCGAG
CTGACCGCGC TGCAAAAGGA ACTGGCGGCG CAGGGGCTCG AGGAGCGCTT CAGGAAGGCG
ACGCTGGTAG GGACCGCAGG GACCGCCACG ACACTTGCCG CCATAGACAT GGGGATGGAA
GATTACGATT ACAAGCGGGT GAACAACCAC ACCATGCCGC TTGCCGCCGT GGAAAAGATA
TACCGGCAGC TACTGCCGCT GACGCCGCAA CAGAGGCTCG AAGTGAAAGG GCTGGAACCA
GGGCGCGAGG ACCTCATCAT AGCCGGGGTA CTGGTGGTTC TCACCACCAT GCGCATCTTC
GGCTTCGAGA CCTTCAAGGT GAGCGACTCG GGGCTGCTCG AAGGGCTGAT ACTAGGGGTT
TGA
|
|---|
| Protein sequence | MNHTVAAIDL GTNTARLLIA GRDPYRQILL KRIITRLGGG FTRERGLSEE AQLRSIAALK
EFALDMSHHG VVRLRAVTTS AVRDAKNGEE FVQRVLAETG IALEVIDGTE EAVLTLRGVG
SILDRKECDL AVFDVGGGST EYTLASDLQP VFSRSLPIGV VRLTEGKAGV VEMEDKISRE
LTALQKELAA QGLEERFRKA TLVGTAGTAT TLAAIDMGME DYDYKRVNNH TMPLAAVEKI
YRQLLPLTPQ QRLEVKGLEP GREDLIIAGV LVVLTTMRIF GFETFKVSDS GLLEGLILGV
|
|---|
| |