Gene Gbem_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2019 
Symbol 
ID6782013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2324039 
End bp2324566 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID642768014 
Productthioesterase superfamily protein 
Protein accessionYP_002138828 
Protein GI197118401 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.528281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATT TTCCCGTTGT TCAGCTTCCC GAATCCATCC TTGACCTGCC GCAGGTCCGC 
GCCCAATGGC CCGGCACCTG TTTCGTCTGT TCCCAGGGGC ATCCCCATGG CCTGCGCCTT
CGCTTCCACC ACACCGACGT CGGCGTCGCC TGCGTCTGCC GCATCCCCGC CGGCTACTGT
GGCTTCGACG GCATGGTTCA CGGCGGCATC ATCTCGGCCC TCATGGACGA GGCGGCGGCC
TATTCGCTCT TCGCCCGCCA CGGCAAGCTC GGCGTGACGC GGGAGATGCA GACCCGATTC
TTGAAGCCGG TCCCCACCGA AACGGAGCTC CGGGTAGTGG GGCAGATCGT TTCTTTCGCC
GCTACGCAGG CGGAGGTCTC CATGGCCATC TTCGACGCGG CCGGACAGCG TCTCGCCGAA
GGACGCACCT TCTGGGCCTT CCCGCGCCTC TCCCGCATCG CCGCCCTGGC AGGGGTTGAG
GAAGCCGTTC TGCAGCGCTT TCTGGACGAC TGCCAGGTGG TGGGGTAG
 
Protein sequence
MQDFPVVQLP ESILDLPQVR AQWPGTCFVC SQGHPHGLRL RFHHTDVGVA CVCRIPAGYC 
GFDGMVHGGI ISALMDEAAA YSLFARHGKL GVTREMQTRF LKPVPTETEL RVVGQIVSFA
ATQAEVSMAI FDAAGQRLAE GRTFWAFPRL SRIAALAGVE EAVLQRFLDD CQVVG