Gene Gbem_1999 details

Gene Information

• Locus tag: Gbem_1999
• ID: 6781992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 2303835
• End bp: 2304482
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642767993
• Product: Paraquat-inducible protein A
• Protein accession: YP_002138808
• Protein GI: 197118381
• COG category: [S] Function unknown
• COG ID: [COG2995] Uncharacterized paraquat-inducible protein A

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACCCG TCGATTCCGG CATGCCGAGC GCCGTCGGCA ACGGCCTTTG CTCCTGCCAT 
GTCTGCCGCC TGGTCTCGCG CCGAAGCCGG TTCTCGCGCC ATGAGCACTG CCCCCGCTGC 
GGCGCCACGC TGCACTTCCG TAAGCCTGGG AGCGTGCAGC GCTGCTGGGC CCTGTTGATA 
GCCTCCTACA TCCTGTACAT ACCGGCCAAC TTGCTGGTCA TGATGGAGAC GGGCTCCCTG 
ATAAATTACC GCAAGGACAC CATAGTAAGC GGCGTCGTGC ACCTGTGGAA GACCGGCTCC 
TGGATGATCG CCGTCATCGT CTTCATAGCC AGCGTGGCCA TTCCGCTATT GAAACTGTTC 
TCGCTCACTT TTTTACTGAT CAGCGTGCAG CGGCGCTCTC ATTGGCGCCC AAGGCAGCGC 
ACCCGCCTGT TCCGGCTTCT GGAGGCGGTG GGGCGTTGGT CCATGCTGGA TATCTACGTG 
GTTACCCTGC TTGCCGCGCT GGTGCAGTTA GGCTCGCTGG CGGTGGTAAA GGCGGGCCCT 
GCCGCCGTCG CCTTCGGCGC CGTGGTGGTA TTCACCATGT TCGCCACCAT GCAGTTCGAT 
CCGCGCCTTA TCTGGGACCC CCTGCAGAAA GAGGATATTC ATGACTGA 

 

Protein sequence

MTPVDSGMPS AVGNGLCSCH VCRLVSRRSR FSRHEHCPRC GATLHFRKPG SVQRCWALLI 
ASYILYIPAN LLVMMETGSL INYRKDTIVS GVVHLWKTGS WMIAVIVFIA SVAIPLLKLF 
SLTFLLISVQ RRSHWRPRQR TRLFRLLEAV GRWSMLDIYV VTLLAALVQL GSLAVVKAGP 
AAVAFGAVVV FTMFATMQFD PRLIWDPLQK EDIHD