Gene Gbem_1990 details

Gene Information

• Locus tag: Gbem_1990
• Symbol: thrS
• ID: 6781982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 2295267
• End bp: 2297177
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642767983
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002138799
• Protein GI: 197118372
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0457996
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAA TAAACGTCAC GCTACCGGAT GGTTCCCAAA GACCCTTGCC TGCAGGTGCC 
TCCATTTTCG ATCTTGCCGC ATCCATCGGA GCGGGGCTTG CCAAGGCGGC CATCGCCGGA 
AAGATCGACG GCAACCTGGT CGACCTCAAT ACGCCTCTTG CCGACGGCGC GCGCGTGGAG 
ATCATCACCG AGAAAAGCCC CGAGGCGCTG GAGATCATCA GGCACTCCAC CTCGCACCTT 
ATGGCGCAGG CCGTAAAGGC GCTCTTTCCG CAGGCGAAGG TGACCATCGG TCCCGCCATC 
GAGACCGGTT TTTACTACGA CTTCGACGTC GACCACCCCT TCACCCCGGA AGACCTCGAG 
AAGATAGAAG AAAAGATGCG CGAGCTCGCC AAGGCCGATC TCAAGATCGA GCGCAAGGAG 
CTCACCAGCG CCGACGCCAT CGCCCTCTTC AAAGGGATGG GTGAGAACTA CAAGGTCGAA 
CTGATCGAGG ACTTGGGGGC CGACAAGGTT TCGCTTTACA GCCAGGGCGA TTTCGTCGAC 
CTCTGCCGCG GGCCGCATCT TCCCAAGACC TCTTTCATCA AGGCCTTCAA GCTCACCTCC 
ATAGCAGGCG CCTACTGGCG CGGCGACGAG AAGCGCCCCA TGCTGCAGCG CGTCTACGGC 
ACCGCCTTTG GCGATAAGAA GGAACTGGAA GCCTACCTCG CCAGGATCGA AGAGGCGAAA 
AAGCGCGACC ACCGCAAGCT CGGCCGCGAA CTGGATCTCT TCTCCTTCAA CGACGAGGTC 
GGCGCAGGAC TCGTGATCTG GCACCCCAAA GGGGCGATGC TGCGCACTAT CCTCGAGGAC 
TTCGAGAGGA AGGAGCACTT AAAGCGCGGC TACGACATCG TCCTGGGTCC GCAGATCCTC 
AAGACCGAAC TCTGGCAGCG CTCCGGGCAC TACGAGAACT ACCGCGAGAA CATGTACTTC 
ACCACGGTGG ACGAGCAGAG CTACGGCGTG AAGCCGATGA ACTGCCTGGC CCACATGATG 
ATCTACCGCT CGCAGCTTCG CTCTTACCGC GACCTGCCGC TGCGCTACTT CGAGCTCGGC 
ACGGTGCACC GCCATGAGCG CGCCGGCGTT CTGCACGGCC TTCTGCGCGT GCGCGGCTTC 
ACCCAGGACG ACGCCCATAT CCTCTGTACC CCGGAGCAGC TCGATGCCGA GATCAAAGGG 
GTCATCCAGT TCGTCACCGA GGTGATGGGT ATCTTCGGCT TCGAGTTCGA GATGGAGCTT 
TCCACCCGTC CCGAAAAGTC GATCGGTTCC GACGACGCCT GGGAGCTCGC CACCAACGCT 
TTGTTGAACG CGCTCAAGGA TTCCGGCCGC CCTTACGAAA TCAACGAGGG GGACGGCGCA 
TTCTACGGTC CCAAGATCGA CATCAAGCTG CGTGACGCGC TTGACAGAAG ATGGCAATGT 
GCTACAATCC AGTGCGATTT TACCCTCCCT GAGCGTTTCG ATCTCACCTA TGTCGACGCA 
GACGGTGAAA AAAAGCGCCC CGTCATGGTG CACAGGGTTA TTCTGGGTGC CATCGAACGC 
TTCATCGGTG TCCTCATCGA ACATTTCGCT GGAAACTTCC CGACTTGGTT GGCACCGGTT 
CAGGCGACCA TCGTTACGGT CACCGACAAC CAGATTCCGT ACGCGCAGGC AGCGTTCGAC 
AAGCTGCGCG CGGCCGGGAT AAGGGTGCAG AAGGATTTCA GAAACGAGAA GCTCGGCTTC 
AAGATCCGCG AAGCCCAGCT CCAGAAGATA CCGTACATGC TGGTTGTGGG GGACAAGGAA 
GTCGAGAGCG GTATGCTGGC GCCGCGTTTC CGCGACGGCA AGAACCTCGA GTCCATGACC 
CCGGAGCAGT TTGTTTCCTT TATCGAAAGC GAAGTCAAAA GTTATAAATA A 

 

Protein sequence

MNEINVTLPD GSQRPLPAGA SIFDLAASIG AGLAKAAIAG KIDGNLVDLN TPLADGARVE 
IITEKSPEAL EIIRHSTSHL MAQAVKALFP QAKVTIGPAI ETGFYYDFDV DHPFTPEDLE 
KIEEKMRELA KADLKIERKE LTSADAIALF KGMGENYKVE LIEDLGADKV SLYSQGDFVD 
LCRGPHLPKT SFIKAFKLTS IAGAYWRGDE KRPMLQRVYG TAFGDKKELE AYLARIEEAK 
KRDHRKLGRE LDLFSFNDEV GAGLVIWHPK GAMLRTILED FERKEHLKRG YDIVLGPQIL 
KTELWQRSGH YENYRENMYF TTVDEQSYGV KPMNCLAHMM IYRSQLRSYR DLPLRYFELG 
TVHRHERAGV LHGLLRVRGF TQDDAHILCT PEQLDAEIKG VIQFVTEVMG IFGFEFEMEL 
STRPEKSIGS DDAWELATNA LLNALKDSGR PYEINEGDGA FYGPKIDIKL RDALDRRWQC 
ATIQCDFTLP ERFDLTYVDA DGEKKRPVMV HRVILGAIER FIGVLIEHFA GNFPTWLAPV 
QATIVTVTDN QIPYAQAAFD KLRAAGIRVQ KDFRNEKLGF KIREAQLQKI PYMLVVGDKE 
VESGMLAPRF RDGKNLESMT PEQFVSFIES EVKSYK