Gene Gbem_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1980 
Symbol 
ID6781971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2283062 
End bp2283874 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID642767972 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002138789 
Protein GI197118362 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.019523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTCA GCGAAGAACA GATCACCCGC TATTCCCGGC ACATCCTGTT GAAGGAAGTC 
GGCGGTAAGG GGCAGAAGAA GCTGCTTGAG GGGCGCGTTC TCATCATCGG GGCTGGCGGC
CTCGGTTCCC CGATTGCCCT GTACCTGGCG GCAGCCGGTG TCGGCACCAT CGGCATCGCG
GACGCCGACG AGGTGGACCT CTCCAACCTG CAGCGCCAGG TCATCCACAC CACCCCTGAC
GTGGGGAAGG CGAAGGTGCT CTCGGCCAAG GAAACGATGC TGGCGATCAA CCCCGAGCTC
ACCGTGAACG CCTACCAGAC CTGGGTTTCC GCCGAGAACA TCGCCGGCCT CATCGCCGAC
TACGACTTCG TCATCGACGG CACCGACAAC TTCGCGGCCA AGTTCCTCAT CAACGACGCC
TGCGTCCTCG CCGGCAAGCC CTACTCCCAC GGCGGGATAC TGCAGTTCGA CGGGCAGACC
ATGACGGTCA AGCCGGGGGA ATCCCCCTGC TACCGCTGCA TCTTCCCGGA GCCTCCCCCG
AAGGACGTGA TCCCGACCTG CTCGCGGGCA GGGGTCATCG GCGTCCTCCC CGGCGTGCTC
GGCACGCTTC AGGCCACCGA GGCGATCAAG TACCTGCTGG GAGCCGGCGA TCTTTTGACC
GGGCGCCTGC TTACCTACAA CGCTCTCAGG ATGCGCTTCA GGGAAATCCC GGTGAAGAAG
AGCGCCAAGT GCCCGATCTG CGGCGACCAC CCCACCATCA CCGAGCTGAA GGACGAGCTT
GACGCCATGA CCGTCTGCGA CCTGGGACAC TGA
 
Protein sequence
MKLSEEQITR YSRHILLKEV GGKGQKKLLE GRVLIIGAGG LGSPIALYLA AAGVGTIGIA 
DADEVDLSNL QRQVIHTTPD VGKAKVLSAK ETMLAINPEL TVNAYQTWVS AENIAGLIAD
YDFVIDGTDN FAAKFLINDA CVLAGKPYSH GGILQFDGQT MTVKPGESPC YRCIFPEPPP
KDVIPTCSRA GVIGVLPGVL GTLQATEAIK YLLGAGDLLT GRLLTYNALR MRFREIPVKK
SAKCPICGDH PTITELKDEL DAMTVCDLGH