Gene Gbem_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1976 
Symbol 
ID6781967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp2280080 
End bp2281159 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID642767968 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_002138785 
Protein GI197118358 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA AAGCAGGGAA AAAACAGATA TTGGTGGCAA TGAGCGGGGG CGTCGATTCA 
TCGGTCACGG CCGCGCTCTT GAAGGAACAG GGACACGACG TCATGGGGGT CTCGCTGCAG 
CTTTACGAGC GCCCGGAATC AACCCCCAGC GGCGGGAAAA CCTGCTGCTC GCTCACCGAC 
GTGATGGACG CGGCCAGGGT CGCCAAGCGA CTGGGCATCC CCTTCGAGGT CATCGACCTG 
AGGGAGCGTT TCAAGGAGCT CGTAATCGAC AACTTCACCG CCGAGTATGC CGCCGGCAGG 
ACCCCCAACC CCTGCGCCCG CTGCAACGAA AGGATCAAGT TCGGCCTGCT GCTGGATATG 
GCCGCCTCCT TTGGCGCGGA TCTCCTCGCC ACCGGGCACT ACGCGCGGAT AGAGCAGGAT 
GCCGAAGAGA TCTACCAGTT GCTTAAAGGG CTCGACCCCG GCAAGGACCA GAGCTACTTC 
CTTTTCGGGA TGAACCAGGA GCAGCTCTCC CGCATCGTTT TCCCGGTGGG GAACCTGGAG 
AAGCGCGTGG TGCGCGAGCA CGCAGCCCGA TTCAACCTGC CGGTGGCCCA AAAGCAGGAA 
AGCCAGGAGA TCTGCTTCAT ACCCGACAAC GACTACGTCA GGTTCCTGGA AGAGGCGGGA 
GTGCGGCCCG AGGCGGGCGA CATCGTGGAC AAAAGCGGCA ACAAGCTCGG GAGCCACGTC 
GGCATCCACA AGTACACCAT CGGGCAGCGG CGCGGTCTGG GGATCGCCTG GAAAGAGCCG 
CTCTACGTCA CGGCGATAGA CGGCGCTACC TCGCGCGTCG TCGTGGGCCC GGAGGAAGAT 
CTGAAGATAG GCGGACTGGT CGCCGGGGAA CTCACCTGGA CCGACAAACC CATCAGTGGC 
GGCTTTAACG GCAGCTGCAG CATCCGTTAC CGGATGCAGC CGGTCCCCTG CTCCGCGCGG 
CTTATCGAGG ACGGGCGCAT GCAGGTGGAG TTCGAAACCC CGCAGCGCGC AGTGACCCCG 
GGGCAGGCAG TCGTCCTTTA CCAGGGGGAT AAAGTCGTAG GCGGCGGCTG GATAAAATAG
 
Protein sequence
MSDKAGKKQI LVAMSGGVDS SVTAALLKEQ GHDVMGVSLQ LYERPESTPS GGKTCCSLTD 
VMDAARVAKR LGIPFEVIDL RERFKELVID NFTAEYAAGR TPNPCARCNE RIKFGLLLDM 
AASFGADLLA TGHYARIEQD AEEIYQLLKG LDPGKDQSYF LFGMNQEQLS RIVFPVGNLE 
KRVVREHAAR FNLPVAQKQE SQEICFIPDN DYVRFLEEAG VRPEAGDIVD KSGNKLGSHV 
GIHKYTIGQR RGLGIAWKEP LYVTAIDGAT SRVVVGPEED LKIGGLVAGE LTWTDKPISG 
GFNGSCSIRY RMQPVPCSAR LIEDGRMQVE FETPQRAVTP GQAVVLYQGD KVVGGGWIK