| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1968 |
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| Symbol | |
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| ID | 6781959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2273030 |
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| End bp | 2274301 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642767961 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002138778 |
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| Protein GI | 197118351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGCG TCGTTGAGTT GAACCTGACC CGGGTGGAGG GTCACGGCAG CGTCAAGGTC
TACCGCGAGG GGTCGCGCGT GGAGCGGGTG GAGCTATGTC TCACCGATTC TCCGCGGCTC
TTCGAGGCGC TTCTGGTCGG CAAGAGCTAT CTGGAAGTGC CGGAGATCGT CTGCCGCATC
TGCTCCCTCT GCTCGACGGT GCACAAGGTG ACCGCGCTCC TGGCGGTGGA GAATGCCTTC
GGGGTGGAGG TCTCGGGGGC GACGGCCCTG ACCCGCGAGC TCATCATGCA GGGGGGAATG
ATCCAGGACC ACGCGCTGCA TCTGTACTGC CTGCTCCTTC CCGACCTTCT CGGCGTGCCG
GGAGTGACCG GGCTGGCCCA GAAGGCGCCC GAACTGCTGA AGGCGGGACT TAGCATCAAG
AGGGTCGGCA ACATGATCCA GGAGACGGTC GGCGGTCGCC TCATCCACTC GGTCAACATC
CGGCTGGGAG GGCTGGGGCA GAGGGTGGGC AAAAAGGAAC TGCTGCGCCT GCGCCATGAG
CTTGAGTCGG TCCTTCCCGC CTGCCGCGAC GCCTACCGGC TCTTCCGCAC TCCCTTCCCT
TTCCCGGAAC TCCCGTCCCC AAACGCATTG GCGGTGGACC CATGCGGCGC CGGCCGTTCC
GCCGCCATCC GGTGCCGCAT GGGCGGAGGG GAATCCTTCG CCGTCTCCGG GTACCGCGAG
GCGATCAAAG AAAGCGTCCT TCCACACTCC AACGCCAAAT ATTCAAAGGT GATGGGGAAA
GAAGCTACGG TGGGCGCGCT CGCCAGGCTC TCCCTCGGCG TCCGGCTCAG AGCGCAGGCT
CAGGGCGTGT TCGACGAGGT AAAGCACGAG ATCCTCGGCA GGGACATACG GGGCAACAGC
CTGGCCCAGG CAATCGAGCT TTGCGACGCA GCCGAGCGCG CGATAGAGCT CATCGACCGC
CTCGTCGAGG AAGGCCAGGG TCCCCCCGAC GACGTCGGAC CGGTCCTGCG CGCGGGGAGA
GGGAGTGCCG CCTGCGAGGC GCCACGCGGC CTGCTGATCC ACAGCTACGG CTTCGACTCG
AACGGCATCT GCACCGAGGC CGACGTCGTC ACCCCCACCG CCTTGAACCA GGGGGCCATG
GCGCGCGACC TGCTGGCGCT GGCGCGGGGA ATGGAGGGGG AAGAGACGAA AAAGATGACC
ACGGCGCTGG AGCGCCTGAT CAGGTGCTAC GACCCCTGCA TCTCGTGTGC GGTGCACGTG
CTGAAGCTCT GA
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| Protein sequence | MGSVVELNLT RVEGHGSVKV YREGSRVERV ELCLTDSPRL FEALLVGKSY LEVPEIVCRI
CSLCSTVHKV TALLAVENAF GVEVSGATAL TRELIMQGGM IQDHALHLYC LLLPDLLGVP
GVTGLAQKAP ELLKAGLSIK RVGNMIQETV GGRLIHSVNI RLGGLGQRVG KKELLRLRHE
LESVLPACRD AYRLFRTPFP FPELPSPNAL AVDPCGAGRS AAIRCRMGGG ESFAVSGYRE
AIKESVLPHS NAKYSKVMGK EATVGALARL SLGVRLRAQA QGVFDEVKHE ILGRDIRGNS
LAQAIELCDA AERAIELIDR LVEEGQGPPD DVGPVLRAGR GSAACEAPRG LLIHSYGFDS
NGICTEADVV TPTALNQGAM ARDLLALARG MEGEETKKMT TALERLIRCY DPCISCAVHV
LKL
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