Gene Gbem_1965 details

Gene Information

• Locus tag: Gbem_1965
• ID: 6781955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 2269618
• End bp: 2270184
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642767957
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_002138775
• Protein GI: 197118348

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0650389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACAAG CAACCGGGAC ATACGTCATG CTGCTCTTGG TGGCCGGACT GGCAACGGGA 
GATCTAGACC CGAAACCGCA ACGGCAGCCG ATCGACCAGG AGGAATACCT GGAGGCGGAC 
GACTGGTTCG AAGCGGGGGT ACTCATGAAC AGCGAGGGGC GCTACGGCGA AGCGGCCGAG 
GCCTTCAGCA AAAGCATCGC CCTTTCTCCC GGGAACGCCG TCTCCTGGCT CAACTTGGGG 
ACCGCCCAAG CGCTTACCGC GGACTACCCT CGCGCCATCG AATCCCTCAA AAGATCAATA 
GCACTGGATC CAAAGCTAGC CCTCGCCTTT TCCAATTTAG GGGAAGTCTG TTTCAGGATC 
TACCGCTATG AGGAAGCCGT CGAAGCTTAC ACTTACCTGC TGGAGTTATG GCCCGGCAAT 
GCCAATGCCC TCTATAAGCT GGGACTGTCA CATCTGTTTC TGAACCAGTG GGGGAAAGCA 
CAGGCCGAGT ACCTCACACT GAAACTTGTC GACCCGGAAC TGGCAGAAAA GTTGAAAAAC 
GCTATTATCC AGAGTAGTAG TGATTAG 

 

Protein sequence

MRQATGTYVM LLLVAGLATG DLDPKPQRQP IDQEEYLEAD DWFEAGVLMN SEGRYGEAAE 
AFSKSIALSP GNAVSWLNLG TAQALTADYP RAIESLKRSI ALDPKLALAF SNLGEVCFRI 
YRYEEAVEAY TYLLELWPGN ANALYKLGLS HLFLNQWGKA QAEYLTLKLV DPELAEKLKN 
AIIQSSSD