Gene Gbem_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1963 
Symbol 
ID6781953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp2267507 
End bp2268139 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID642767955 
Productisochorismatase hydrolase 
Protein accessionYP_002138773 
Protein GI197118346 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0190447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAA GAGGAGCACT TCTTGTTGTC GACGCGCAGG TGGATTTCTG TCCGGGCGGG 
GCGCTCCCCG TCCCCCGGGG CGACCAGGTG ATCCACGCAC TGAACCGGTA CCTGGATCTG 
TTCAAGCGCA GGAGCGCGCC CATCTTCGCC TCGCGCGACT GGCATCCGAA GCAGAGCAAG 
CACTTCAAGG AAAACGGCGG AGAATGGCCC GCCCACTGCG TCCAGGGAAC CCTCGGCGCC 
GAATTCCACC CGGCACTCGT ACTTCCAAGC GACACCATCG TCATCTCCAA GGGGATGGCC 
TCCTGGGACG ACGGATACTC GGCCATGCAG GGGGTAACCG AGAACGGCAC CCCCTTCACC 
ATGCTGCTGC GGCACATGGA GCTGGACCGG CTCTACGTCG GGGGGCTCGC CACCGATTTC 
TGCGTGAGAC AGACGGTGCT CGAAGCCTTG AAAGCGGGAT TCGACGTCAC CCTCCTGACC 
GATGCCGTAG GGGGGGTCGA CCTCAGGCCG GGGGATTCTG AGCGGGCCGT GGCAGAGATG 
ATCCACTCCG GCGCCGACGT CACCACCCTC GCCTCCATCG GCACCGCGGT GGCGTGGGAT 
GGGGCGCCGC AGCGGCAGCA GGGAAGCGGA TAG
 
Protein sequence
MQRRGALLVV DAQVDFCPGG ALPVPRGDQV IHALNRYLDL FKRRSAPIFA SRDWHPKQSK 
HFKENGGEWP AHCVQGTLGA EFHPALVLPS DTIVISKGMA SWDDGYSAMQ GVTENGTPFT 
MLLRHMELDR LYVGGLATDF CVRQTVLEAL KAGFDVTLLT DAVGGVDLRP GDSERAVAEM 
IHSGADVTTL ASIGTAVAWD GAPQRQQGSG