| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1961 |
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| Symbol | |
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| ID | 6781951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2264474 |
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| End bp | 2266072 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767953 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002138771 |
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| Protein GI | 197118344 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.829673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTA TCGTAACCGA TGAAGTGGCT CAGGAAGGAC TGGCACTTTT GCAGCGCGAC
CCGCGCGTGC AGATGGACAT CAAGCTGGGA CTGAAGAAGG AAGAGCTTTA CTCGATCATT
GGTGATTACG ACGTTATCAT CACCAGAAGC GGCACCACCG TGGACAAGCC CCTGCTTGAC
GCAGCGACCA ACCTGAAAAT GGTGGCGCGC GCCGGCGTCG GCGTCGACAA CGTGGATGTC
GACTATGCCT CCGCCAAGGG CGTCATCGTC GTCAATGCAC CTTTCGGCAA CACCAACAGC
GCGGCGGAAC ACGCCATGGC GCTGCTGCTT TCCTTCTGCC GCAATATCAC CAAGGCTAAC
TCGTCCCTCA AAGGTGGCGC CTGGAAGCGT GCCCCCTTCA CCGGCTACGA ACTTAAAGGG
CGCACCGCCG GCGTCATCGG TCTGGGCAAG GTAGGGGGAA GGGTGGCTAC CCGCCTCAAG
GCCTTCGAGT GCGAAGTGCT CGCCTGCGAC CCGTACATCG CAGAGAAAAG GGCGCACGAC
CTCGGCGTCA AGCTGGTTTC GCTGGATGAA ATCGTCCGCG TCTGCGACAT CATCACCGTC
CACACCCCGC TCACCGCGGA GACCAGCAAC ATGATCGGCA AGAAAGAGCT CGCCGCCATG
AAGGAAGGGG TCATCGTCAT CAACGCGGCG CGCGGCGGCA TCATCAACGA GGAGGCGATG
CTGGAGGCGC TCGATTCCGG CAAGGTAACC GGCGCAGCCT TCGACGTCTG GAGCCAGGAG
CCCCCCGACA CCGATACCCT GAAAAAGCTG ATCGGGCACG AGAAGATGGT GGTCACGCCG
CACCTGGGCG CCAACACCTT CGAAGCGCAG GTGAACGTGG CGGTGGACGT CTCCCGTGAG
ATCATCCACT ACCTGGACGA GCAGCCGCTG GAGAACGCCA TCAACATCCC GAGGTTCGAC
GCAGCCCTCA TGGGGCAGAT GCGTCCTTAC CTGAACCTGA TGAACGTCCT GTCCGATTTC
GTCATCCAGT TGGTGGACAC CAACCTGAAC AAGATCACCT TCACCTATAC CGGCAACCTC
GCCCAGTACG ACTGCACGCC GATCACCGTC CTTGGTCTCG CGTCGCTTCT GAACCGCAGG
GTCGAGCAGG ACGTGAACAT GGTCAACGCG CAGCTTGTCG CGGACAACAT GGGGATCGTC
GTGGAAGAGG TGAAGTCCAA CCAGGCCGAG GCCTTCTCCA ACATGATCAC CATCGCCATC
GAGGGCCCCG GCGAAAAGAG GCTCATCAGC GGTACCTTGT TCGAAGGGAT TCCGCGCATC
GTCAAGCTGC GCGACTACCA GATGGACTTC CGCCCCGAAG AGCACATGCT GCTCATGGCT
TACGGCGACC GTCCGGGCAT CATCGGCAAG ATCGGCACCA TCCTGGGCAC CCATGAGATC
AACATCGCCT CGATGAACCT GGGGCGTCGC GAGAAGAAAG GGGAGGCGAT GGTCATCCTC
TCCCTCGATT CCGCCGTGAC CCCGGAAGTC GTGGAAGAGG TGCGAGGCGC CACCGATGCG
ACCTTCGTCA AACCGCTCTA CCTGGTGACC GCGAAGTAG
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| Protein sequence | MKIIVTDEVA QEGLALLQRD PRVQMDIKLG LKKEELYSII GDYDVIITRS GTTVDKPLLD
AATNLKMVAR AGVGVDNVDV DYASAKGVIV VNAPFGNTNS AAEHAMALLL SFCRNITKAN
SSLKGGAWKR APFTGYELKG RTAGVIGLGK VGGRVATRLK AFECEVLACD PYIAEKRAHD
LGVKLVSLDE IVRVCDIITV HTPLTAETSN MIGKKELAAM KEGVIVINAA RGGIINEEAM
LEALDSGKVT GAAFDVWSQE PPDTDTLKKL IGHEKMVVTP HLGANTFEAQ VNVAVDVSRE
IIHYLDEQPL ENAINIPRFD AALMGQMRPY LNLMNVLSDF VIQLVDTNLN KITFTYTGNL
AQYDCTPITV LGLASLLNRR VEQDVNMVNA QLVADNMGIV VEEVKSNQAE AFSNMITIAI
EGPGEKRLIS GTLFEGIPRI VKLRDYQMDF RPEEHMLLMA YGDRPGIIGK IGTILGTHEI
NIASMNLGRR EKKGEAMVIL SLDSAVTPEV VEEVRGATDA TFVKPLYLVT AK
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