Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1956 |
Symbol | trpD |
ID | 6781946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2260100 |
End bp | 2261158 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767948 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_002138766 |
Protein GI | 197118339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCGCA AGGCAATCGC ACGTGTTGTG GAACGGCAGG ATCTTTCCGA AGCAGAGATG ATCGAGGTCA TGGACCAGGT GATGTCCGGC GGCGCCACCC CGGCGCAGAT CGCCTCCTTC ATCACCGCCC TCAGGATGAA GGGGGAGACG GTTGACGAGA TCACCGGCGC CGCGCGCGTC ATGCGCGACC GGGCGCTTCC CATCCGGGTC GGCAAGAGCG TGCTCGGCAT CGACCGCGAC GACATCAACC TCGACCGCGA GACCATCCTC GACACCTGCG GCACCGGCGG CAGCGGCACC AACAGCTTCA ACATCTCCAC CACCGTAGCC TTCATCGTAT CCGCCTGCGG CGTCAAGGTC GCCAAGCACG GCAACCGCGC GGTCTCCTCT TCCTGCGGCT CGGCCGACGT CCTGGAGGCG TTGGGGGTGA ACCTCGACGT CACCCCCGAT GTGGTCGAGC GGAGCATCGC CCAGATCGGC ATCGGCTTTC TCTTCGCCCC GGCGCTTCAC GGCGCCATGA AGCACGCCAT CGGCCCCAGG CGCGAGATCG GCATCCGTAC CATCTTCAAC ATATTGGGCC CCTTGACCAA CCCCGCCGGC GCCGACTGCC AGGTGCTCGG CGTCTACCGC GAGGACCTGG TGGAGAAGCT CGCGCAGGTC TTGAAGAAAC TCGGCTGCCG CAGCGGCTTC GTGGTGCATG GCTGCGACGG CATGGACGAG ATCACCCTGA CCGGCGAGAG CACCGTGGCC GAGATCACCG CCGACGGCGT GAAGCTCTAC AAGGTAACCC CGGAACAGTT CGGCCTGGAG CGCGCTCCGC TTGCCGAACT CCACGGCGGC GATGCGCTGG GAAACGCGGT GATCGTGAGG GACATCCTCT CCGGCAAGGA CGGCGCCAAG AGGCGCATCG TGCTTTTGAA CGCGGGGTAC GCGCTGGTCG CCACCGGGAA GGCGAAGGAT GTCGCCGAGG GGATACGTCT CGCCGCCGAG ACCATTGACT CCGGCGCGGC GATGAAGCAG CTGGAGCGGC TGGTCGCGCT TACCAACGAG GCGGAGTAG
|
Protein sequence | MIRKAIARVV ERQDLSEAEM IEVMDQVMSG GATPAQIASF ITALRMKGET VDEITGAARV MRDRALPIRV GKSVLGIDRD DINLDRETIL DTCGTGGSGT NSFNISTTVA FIVSACGVKV AKHGNRAVSS SCGSADVLEA LGVNLDVTPD VVERSIAQIG IGFLFAPALH GAMKHAIGPR REIGIRTIFN ILGPLTNPAG ADCQVLGVYR EDLVEKLAQV LKKLGCRSGF VVHGCDGMDE ITLTGESTVA EITADGVKLY KVTPEQFGLE RAPLAELHGG DALGNAVIVR DILSGKDGAK RRIVLLNAGY ALVATGKAKD VAEGIRLAAE TIDSGAAMKQ LERLVALTNE AE
|
| |