Gene Gbem_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1946 
Symbol 
ID6781936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2249776 
End bp2250477 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID642767938 
ProductABC transporter related protein 
Protein accessionYP_002138756 
Protein GI197118329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.987949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGG TAGAGAACAT CAGCGTGAAC TACGGCGCCA TCAAGGCGCT GCAAAACGTT 
TCCTTCCAGA TCAACCAGGG GGAGATCGTG GCACTCATCG GCGCCAACGG TGCCGGCAAG
ACCACTATAC TCAACACCAT TTCCAATATC GTCCCCTCCG TCGCCGGAAA GATCTCCTAT
ATGGACCGGG AGATCACCAA GCTCCCGCCG CACGAGATCG TGAAGCTCGG CATCTCGCAG
GTCCCCGAAG GGCGCCGCGT CTTCGCCAAG ATGAGCGTGC TGGAGAACCT GGAGATGGGC
GCCTATACCC GCAACGACAA CGAGGTCGGC TCCGACATGG AGAAGATCTT CCAGCGTTTC
CCGCGCCTGA ACGAGCGCAA GAAGCAGGCG GCCAAGACCC TTTCCGGCGG CGAGCAGCAG
ATGCTGGCCA TGGGGCGGGC GCTCATGTCC CGCCCGAAGC TGCTCCTGCT CGACGAGCCC
TCCATGGGCC TCGCCCCGAT GCTGGTGGAG CAGATCTTCC AGATCATCCA GGAGATCAAC
GCCGGCGGCA CCACCATCCT GCTGGTGGAG CAAAACGCCA ACATGGCGCT CTCCATCGCC
CACCGCGCCT ACGTCCTCGA GACTGGCGAG GTCGTGCTGC AGGGGGACGC CAAGGAACTT
GCCTCCAACC CCGAGGTGAG GAAGGCGTAC CTGGGAGAGT AG
 
Protein sequence
MLKVENISVN YGAIKALQNV SFQINQGEIV ALIGANGAGK TTILNTISNI VPSVAGKISY 
MDREITKLPP HEIVKLGISQ VPEGRRVFAK MSVLENLEMG AYTRNDNEVG SDMEKIFQRF
PRLNERKKQA AKTLSGGEQQ MLAMGRALMS RPKLLLLDEP SMGLAPMLVE QIFQIIQEIN
AGGTTILLVE QNANMALSIA HRAYVLETGE VVLQGDAKEL ASNPEVRKAY LGE