Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1946 |
Symbol | |
ID | 6781936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2249776 |
End bp | 2250477 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642767938 |
Product | ABC transporter related protein |
Protein accession | YP_002138756 |
Protein GI | 197118329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.987949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGG TAGAGAACAT CAGCGTGAAC TACGGCGCCA TCAAGGCGCT GCAAAACGTT TCCTTCCAGA TCAACCAGGG GGAGATCGTG GCACTCATCG GCGCCAACGG TGCCGGCAAG ACCACTATAC TCAACACCAT TTCCAATATC GTCCCCTCCG TCGCCGGAAA GATCTCCTAT ATGGACCGGG AGATCACCAA GCTCCCGCCG CACGAGATCG TGAAGCTCGG CATCTCGCAG GTCCCCGAAG GGCGCCGCGT CTTCGCCAAG ATGAGCGTGC TGGAGAACCT GGAGATGGGC GCCTATACCC GCAACGACAA CGAGGTCGGC TCCGACATGG AGAAGATCTT CCAGCGTTTC CCGCGCCTGA ACGAGCGCAA GAAGCAGGCG GCCAAGACCC TTTCCGGCGG CGAGCAGCAG ATGCTGGCCA TGGGGCGGGC GCTCATGTCC CGCCCGAAGC TGCTCCTGCT CGACGAGCCC TCCATGGGCC TCGCCCCGAT GCTGGTGGAG CAGATCTTCC AGATCATCCA GGAGATCAAC GCCGGCGGCA CCACCATCCT GCTGGTGGAG CAAAACGCCA ACATGGCGCT CTCCATCGCC CACCGCGCCT ACGTCCTCGA GACTGGCGAG GTCGTGCTGC AGGGGGACGC CAAGGAACTT GCCTCCAACC CCGAGGTGAG GAAGGCGTAC CTGGGAGAGT AG
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Protein sequence | MLKVENISVN YGAIKALQNV SFQINQGEIV ALIGANGAGK TTILNTISNI VPSVAGKISY MDREITKLPP HEIVKLGISQ VPEGRRVFAK MSVLENLEMG AYTRNDNEVG SDMEKIFQRF PRLNERKKQA AKTLSGGEQQ MLAMGRALMS RPKLLLLDEP SMGLAPMLVE QIFQIIQEIN AGGTTILLVE QNANMALSIA HRAYVLETGE VVLQGDAKEL ASNPEVRKAY LGE
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