| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1941 |
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| Symbol | |
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| ID | 6781931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2242890 |
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| End bp | 2245994 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767933 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002138751 |
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| Protein GI | 197118324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAGA AAATAGTTTC TTATACACTG CGGCACAGGG CGATGATCCT CTTCCTGTCG
CTCTTGATTA TCGCGTTCGG GCTCTACTCG TATTACCGCC TGCCCATCGA CGCCTTTCCC
GACGTGACCA ACATCCAGGT CGAGGTGGTG AGCCATGCGG ACGGCCTTTC CGCCATCGAG
ATCGAGAGAA ACGTCACCTA CCCGATAGAA ATGGCCATGC GCGGCCTGCC CGATATCGAG
CAGATGCGCT CGGTCACCAA GTTCGGCCTT TCCATCGTCA CCATCGTCTT CAAGGACAAC
GTCGACATCT ACTTCGCCCG GCAGCTCGTC TTCGAGCGGC TGGCGGAGGC GCGGGAGAAA
GTCCCCAAGG GGGTCGAGGT CGCCATGGGA CCTATCGGCA CCGCCATGGG GGAGATCTAC
CAGTACACCC TGGAAGGGAA GATGCCGGAG GATCCGCAGC AGAAGATCGC TTATCTCACC
AACCTGCGCA CCGTCCAGGA GTGGATAGTC ACCCCGCAGC TGAAAAACGT GGCCGGCGTC
AACGAGATCA ACTCCTTCGG CGGCTACTTC AAGCAGTACC AGGTGCTGGT CGCGCCGGAA
AAGCTTTTGA AGCACGCGGT CACAGTCGAG GATGTCTACT CGGCCATCGG CAGCAACAAC
GAAAACGTCG GCGGCAACCT CCTGGAGCGG GGCACGGACC AGTACATCGT CCGGGGCGTG
GGGCTGATAC GGGACACAGC AGACATCGAG AACATAGTGC TCAAATCCGC GGGTGGCACG
CCTACTTATC TGCGCGACGT GGCCCAGGTA AAGGTGGGGG AGGCGGTCCG GATGGGCGCC
GCCATGAAAA ACGGCAAGGA CGAATGCGTG GGGGGCATCG TCATGATGCT GCGCGGCGAG
AACAGCCGCG ACGTCGTGCG GCGGGTCGCG GCCAAGGTGA AGGAGATGAA CGAGAACAAC
GTCCTTCCCG ACGGGATGAA GATCGTACCC TTCTACGACC GCAGCGACAT AGTCAAGGCG
AGCGTGGGGA CGGTGAACAA GGCACTCATC GAGGGGGCCA TCCTGGTCCT CATCGTGCTC
TACCTGCTGC TGAACAGCTT CCGGGGGAGC CTCGTGGTCC TGATCGCCCT GCCGCTGTCG
CTTCTGGCCA CCTTCATCGT CATGAAGCTT GCCGGCATCA GCGCAAACCT GATGTCGCTG
GGCGGCCTTG CCATTTCCAT CGGCATGATC ATCGACACCA CCATCATCCA GGTCGAGAAC
GTGCAGCGGC ACCTGAGCGA GGAGGGGGGG AAGCATCCGA AGCTTGCCAC CGTCTTGAAA
GCGGTGATGG AGGTGCGAAA GCCCAGCATC TTCGGAGAGC TGATCATCGC GCTTACCTTC
ATCCCCATCA TCTCCCTGGA AGGGATCGAG GGGAAGATGT TCAGCCCGCT CGCCATCACG
GTCGCCATAG CGCTCCTGGC CTCCCTGTTC CTCTCCATCT TCGTGATCCC TGTGCTCTGC
ATCATGTTCC TGAAGCCGCA GCCGGAGAAG GAGAGCTACC TGATGCGGCA GGCGAATCAA
CTTTATCTGC CGCTTCTCGA CTGGGCCATG CAGAAGCGGA AGCTGGTTCT TTCGGGGGGC
GGATTCCTCC TGCTGGTTTC GCTCCTGCTG GTCACGAAGC TCGGGACGGA GTTCATACCT
GTCATGGACG AGGGGTCCTT CGACATGGAC GTGGCGCTTC TTCCGGGAGT TTCGCTGGCG
AAGGCGATGG AGGTGAACCA GCGGGCCGCG GAGAAGCTGC AGCAGTTCCA GGAACTGGAC
ACGGTGATTT CCAGGACCGG GCAGACCGGC GTGGCGCTCG ACACCCGCGG CTCCGACAAA
ACGGGGTATG TCGGCATCTA CAAGCCCAAA AGCGAATGGA AGCGCGACAT CACCAAGGAA
GAGCTCACCA ACGAGATGCG CGAGTCGCTG GAGTCCATCG CCGGGATCAA CTTCGGCTTC
AGCCAGCCGA TCCAGTGCCG CATCGACGAA CTGGTGGCCG GAACCCGTGC CCAGCTGATC
GTGAAGCTTT TCGGCGAGGA CATAAACGTT TTGAGCGAGA AGTCCGCCGA GATCGCCAAG
GTGCTTTCCA CCGTCAGGGG GGGGACGGAC CTGAACGCGG AGAAGGTTAC CGGCCAGCCC
TACCTGACCG TGGACATCGA CCGGGCGAAG ATCGCGCGCT TCGGGCTTAA CATAAGCGAC
GTACAGAAGG TGATCGAGAT CGCCGTTGCC GGCAAGGCTG CATCGCAGCT CTACGAGGAA
AACCGCAGCT TCGACATCAC CGTCCGGCTC CCCGAGGAGC AGAGGAACTC GCTGGACGCC
ATCAAGAACC TGCTGGTCAC GACCAAGACC GGCGTCAATG TCCCCCTGGA GCAGTTGGCC
GAGGTGAAGA TGGTCGAGGG GCCGGCACAG ATCAGCCGCC AGGACGGGGT CAGGCGGATC
GGCGTCGAGA TGAACGTCAC CGGCCGCGAC ATAGGTGGCT TCGTCGCCGA GGCGAAGCAG
AAGATAAAGG AAAAGGTGAA GTTGCCGCCG GGATACTACC TGACCTGGGG CGGTCAGTTC
GAGAACCAGC AGCGCGCCAT GAACAAGCTG ATGATCATCG GGCCGGTGGC AATCGCCCTG
ATCCTCTTGC TTTTGTACGT GACCTTCAGG TCGATCAGGC TCGCCTTTCT GGTCATCTCC
AACCTTCCCT TCGCCCTGAT AGGCGGCGTG TTCGCGCTCT TTCTTTCCGG CCAGTACCTC
TCCGTTCCCG CCTCGGTCGG GTTCGTGGTG CTGTTCGGCG TGGCCGTGTT GAACGGCCTG
GTCTTGGTGT CGCGCATATC GCAGCTCCGC GAGGAGGGTA TGGAAATGCA GGAGGCGATC
CGGAAGGGGA GCCTGGACCG CCTGCGCCCG GTGCTGATGA CCGCGGCCAT TGCCATCTTC
AGCCTGATAC CGATGCTCCT GGCCGGCGGG ACCGGGTCGG AGATCCAGAA ACCGCTGGCG
ACGGTTGTGG TGGGGGGGCT CGTCACCTCG ACCTTGTTGA CCCTGCTCAT CATCCCTTCG
GTGTATAGCT GGTTCGAGAA GAGGGAAATT CAAGAGGAAA GCTAG
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| Protein sequence | MLEKIVSYTL RHRAMILFLS LLIIAFGLYS YYRLPIDAFP DVTNIQVEVV SHADGLSAIE
IERNVTYPIE MAMRGLPDIE QMRSVTKFGL SIVTIVFKDN VDIYFARQLV FERLAEAREK
VPKGVEVAMG PIGTAMGEIY QYTLEGKMPE DPQQKIAYLT NLRTVQEWIV TPQLKNVAGV
NEINSFGGYF KQYQVLVAPE KLLKHAVTVE DVYSAIGSNN ENVGGNLLER GTDQYIVRGV
GLIRDTADIE NIVLKSAGGT PTYLRDVAQV KVGEAVRMGA AMKNGKDECV GGIVMMLRGE
NSRDVVRRVA AKVKEMNENN VLPDGMKIVP FYDRSDIVKA SVGTVNKALI EGAILVLIVL
YLLLNSFRGS LVVLIALPLS LLATFIVMKL AGISANLMSL GGLAISIGMI IDTTIIQVEN
VQRHLSEEGG KHPKLATVLK AVMEVRKPSI FGELIIALTF IPIISLEGIE GKMFSPLAIT
VAIALLASLF LSIFVIPVLC IMFLKPQPEK ESYLMRQANQ LYLPLLDWAM QKRKLVLSGG
GFLLLVSLLL VTKLGTEFIP VMDEGSFDMD VALLPGVSLA KAMEVNQRAA EKLQQFQELD
TVISRTGQTG VALDTRGSDK TGYVGIYKPK SEWKRDITKE ELTNEMRESL ESIAGINFGF
SQPIQCRIDE LVAGTRAQLI VKLFGEDINV LSEKSAEIAK VLSTVRGGTD LNAEKVTGQP
YLTVDIDRAK IARFGLNISD VQKVIEIAVA GKAASQLYEE NRSFDITVRL PEEQRNSLDA
IKNLLVTTKT GVNVPLEQLA EVKMVEGPAQ ISRQDGVRRI GVEMNVTGRD IGGFVAEAKQ
KIKEKVKLPP GYYLTWGGQF ENQQRAMNKL MIIGPVAIAL ILLLLYVTFR SIRLAFLVIS
NLPFALIGGV FALFLSGQYL SVPASVGFVV LFGVAVLNGL VLVSRISQLR EEGMEMQEAI
RKGSLDRLRP VLMTAAIAIF SLIPMLLAGG TGSEIQKPLA TVVVGGLVTS TLLTLLIIPS
VYSWFEKREI QEES
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