| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1934 |
|---|
| Symbol | |
|---|
| ID | 6781924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2235574 |
|---|
| End bp | 2236767 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767926 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002138744 |
|---|
| Protein GI | 197118317 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000937878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTA AGAAGATCAG CGCATTGCTC TTGGTAGCGA TGCTGGCAGC CGGCGCATTC
GGCTGCAAGA AGAAGGAAGA GGCCGCAGCC CCGGCTGCAG GAGCCGCCAA ACCGGCAGGC
AACACCGTGA AGATCGGTTT CCTCGGCGCT CTCACCGGCG ACGTGGCGAT GTTCGGCAAG
CCGACCCTCG AAGGTATGAA GATGGCTGCT GCTGAAATCA ACGCAGCCGG CGGCATTCTC
GGCAAGCAGA TCGAGATCGT CGAGGCCGAC AACCGCGGCG ACAAGCAGGA AGGCGCTTCG
GTCACCCAGA AATTCATCTC CCGCGACAAC GTGACCGCCA TCGTCGGCGA CCCGACCACC
GGCATCACCA AGGTTGCCGC TCCCATCGCG CAGAAGGCAG GCGTGGTGCT GCTGTCCGCC
GGCGCCACCG GCCCGGGCGT GGTCGAAGTG GGCGATTACA TCTTCCGCGA CACCCTGCTC
GACTCCATCG CTATTCCGGC CTGCATCCAG TACTTCGCGA AGGACCTCGG CTTCAAGAAG
GTCGCCATCA TCACTTCCGA CAACAACGAC TACTCGGTCG GCCTTTCCCA GACCTTCCGC
GATGCCGCTG CCAAGGTTCC CTCGATCAAG ATCGTAGCCG ACGAGAAGGT GAAGGACGGC
GACAAGGACT TCTCCGCTCA GATCACCAAC ATCAAGGCTA AGAAACCGGA CGTCATCCTC
TTCTCCGGTT ACTACACCGA GGGCGCTCTG ATCATGAAAG AGGCGCGCAA GCAGGGTCTC
AAGTCCCCGA TGTTCGGCGG CGACGGACTC TTCTCGCCTA AATTCATCGA GCTTGGCGGC
CCCGCAGTCG AGGGCTCCAT GTCCGCTCTG GGCTTCTCCA CCGAGCAGGC TTCCCCTGCG
ACCGCGAAAT TCATCGAGGC GTTCAAGGCG AAGCATAACG GCGAACTCCC GGGCCTCTTC
GACGCCCAGG GCTACGACGC AGTGATGCTC CTGGCAGACT CCATGAAGCG CGCCAACAGC
GTAGACGCCA AGGTATTCAA GGATGCCCTT GCCAAGACCA AAGGCTTCGA AGGCGTTTCC
GGCACCATCA GCATGCAGGC CAACCGCGAG CCGATCAAGA GCCCGCTTTC CCTTCTCTTT
GTGAAGGACG GCAAGTTCGT GCTGAAGGCA AAAGTCCCCG TCAAAATGGA CTAA
|
|---|
| Protein sequence | MSFKKISALL LVAMLAAGAF GCKKKEEAAA PAAGAAKPAG NTVKIGFLGA LTGDVAMFGK
PTLEGMKMAA AEINAAGGIL GKQIEIVEAD NRGDKQEGAS VTQKFISRDN VTAIVGDPTT
GITKVAAPIA QKAGVVLLSA GATGPGVVEV GDYIFRDTLL DSIAIPACIQ YFAKDLGFKK
VAIITSDNND YSVGLSQTFR DAAAKVPSIK IVADEKVKDG DKDFSAQITN IKAKKPDVIL
FSGYYTEGAL IMKEARKQGL KSPMFGGDGL FSPKFIELGG PAVEGSMSAL GFSTEQASPA
TAKFIEAFKA KHNGELPGLF DAQGYDAVML LADSMKRANS VDAKVFKDAL AKTKGFEGVS
GTISMQANRE PIKSPLSLLF VKDGKFVLKA KVPVKMD
|
|---|
| |