| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1931 |
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| Symbol | |
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| ID | 6781921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2232405 |
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| End bp | 2233223 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642767923 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002138741 |
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| Protein GI | 197118314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000387195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCCC GGCCAGGACG GTATGAAAAA CTGATGAGTA TTGATGCAAA AAAGCAGATC
ATCGACGTCG GGGACGGTGC AGCCATCCCC CGCAAAAGCG ACCGCGGACT CTTTACCGCG
TGGCGCATAG CCTTCTTTGG GGCCATCGGC ACCCTGATCT ATCTGGTAAA GACAAAACCT
GACCCTTATC TCAACATTCT CAAGTTCGTT CCCGACGGCA TACTGGTTAC TTTCCAGGTG
ACCCTCGGGG CGATACTTTT AGCCATCGTC TTCGGCCTCT TCACCGGCTT GGGGAGGATC
TCCAAGAACC GGTTCCTAAA CGGCGCAGCC TCGCTTTACG TCGAGATCAT CCGCGGCATC
CCCCTCCTGG TGCAGATCTT CTACATCTAC TACGCCCTTG GGCGCTTCGT GCAGGTCCCC
CCGATCCTTT CCGCCATAAT CGCCATGGCT GTCTGCTACG GCGCTTACAT GGGCGAGGTG
GTACGGGCGG GGATCGAGTC GATCCACAAG GGGCAGAGGG AAGCAGCGCT TTCGCTCGGC
ATGAACGGGC GCCAGACCAT GATCCACGTC ATCCTGCCGC AGGCGGTGAA GGTGATCCTG
CCCCCGGTGG GCAACGAGTT CATAGCCCTT TTGAAGGATT CCTCGCTTGT TTCCATCATC
GCCGTCGCGG ATCTTTTGCG CCGCGGCCGC GAATTCGCCT CCGAGTCTTT CACCTATTTC
GAGACCTACA CGGTCATAGC GCTGATTTAC CTGATCATCA CCTTGTTCTT CTCGAAGATC
ATCGGCGTCA TGGAGGAGCG TGTCAGTGTC AACAAGTAA
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| Protein sequence | MLARPGRYEK LMSIDAKKQI IDVGDGAAIP RKSDRGLFTA WRIAFFGAIG TLIYLVKTKP
DPYLNILKFV PDGILVTFQV TLGAILLAIV FGLFTGLGRI SKNRFLNGAA SLYVEIIRGI
PLLVQIFYIY YALGRFVQVP PILSAIIAMA VCYGAYMGEV VRAGIESIHK GQREAALSLG
MNGRQTMIHV ILPQAVKVIL PPVGNEFIAL LKDSSLVSII AVADLLRRGR EFASESFTYF
ETYTVIALIY LIITLFFSKI IGVMEERVSV NK
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