Gene Gbem_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1917 
Symbol 
ID6781907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2216792 
End bp2217193 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID642767909 
ProductPilT protein domain protein 
Protein accessionYP_002138727 
Protein GI197118300 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.209239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCC TCGATACCAA TATCCTGGTG CGGTACCTGA TCAAGGACGA TCCCGACCAA 
GCTGTACTGG CGACCAATTT TTTAGCAAAC AACCGATGCT TTCTTCACAA GTCGGTCCTT
CTCGAACTTG TCTGGGTGTT GGCGTCGCCA GCCGGTTATA AGCTCTCCCG GGAAACGGTA
CACGAAAGAC TGCTCCACGT TCTCGGTCTT TCCTGTATTG AAAGTGAAGA CCCCACCATT
GTATCCCAAG CGCTTACGTG GTATGCGGAA GGCATGGACT TCGGTGACGC CCTCCATCTA
GCCAGTAGCA GTGAACTTGC TGGCCTTGCG ACTTTTGATA AGAAATTTGC ATCAACTGCT
GAAAAGCTAG ATGCGAAGCC CCCGATTACT CTAATCAGTT AA
 
Protein sequence
MIALDTNILV RYLIKDDPDQ AVLATNFLAN NRCFLHKSVL LELVWVLASP AGYKLSRETV 
HERLLHVLGL SCIESEDPTI VSQALTWYAE GMDFGDALHL ASSSELAGLA TFDKKFASTA
EKLDAKPPIT LIS