| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1892 |
|---|
| Symbol | |
|---|
| ID | 6781882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2191480 |
|---|
| End bp | 2192061 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642767884 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_002138702 |
|---|
| Protein GI | 197118275 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTGA TCGCGGGTGA GGCCCGAGGG CGCCAGCTCT TCGCCCCCAA GACCATGCGG
GTACGCCCTA CCTCGGACCG GGTCAAGGAG GCGCTCTTCA GCATACTCTT GAGCCGGCTG
GGCGACCTGG GCGGCATGAG GGTTTTGGAC GTCTTCGCAG GGACCGGGAA CCTCGGCATC
GAAGCCTTGA GCCGCGGCGC CGATTGCGCC GTTTTTATCG ACGCGCACCG GGAATCGGCA
GAGGCGATCC GGAAAAACCT GGAGACGACC AGGTTCACGG AGAAGGGAAA GGTCGTGACG
CAGGAAGCGG CGGCGGCGCT CAAGTGGCTC GCGCGCGGCG AGAAGCCTTT CCATCTGGTC
TTTCTCGATC CACCCTACGG CGAGGGGCAC ACGGAGCGGG TGCTGGAGCT TCTCTCCTCC
TCCCCCCTCA TCGATGCAGG CTCGACCGTG GTCGCCGAGT TTGCGGCCAA AGAAGAGATC
CCCCGCAGTT TCGGCAGGCT AACGGAGATC GAGCGACGCG TCTACGGCGA CACCGCCCTC
TCCTTTTTAA CTATTTCGGA CAGAGGTGAA ACGTGCCCCT GA
|
|---|
| Protein sequence | MRVIAGEARG RQLFAPKTMR VRPTSDRVKE ALFSILLSRL GDLGGMRVLD VFAGTGNLGI
EALSRGADCA VFIDAHRESA EAIRKNLETT RFTEKGKVVT QEAAAALKWL ARGEKPFHLV
FLDPPYGEGH TERVLELLSS SPLIDAGSTV VAEFAAKEEI PRSFGRLTEI ERRVYGDTAL
SFLTISDRGE TCP
|
|---|
| |