| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1888 |
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| Symbol | |
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| ID | 6781878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2187490 |
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| End bp | 2189739 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767880 |
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| Product | malic enzyme |
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| Protein accession | YP_002138698 |
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| Protein GI | 197118271 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AATTGGGTGC CCTTGATTAC CACTCAAGCG GCAGAAAAGG TAAGATCGAA
GTCATCGCCA CCAAGCCGTG CCAGACCGCA GCCGACCTGT CCCTCGCCTA CTCTCCGGGG
GTCGCGGAAC CCTGCCTGGC CATCCAGGAG AACCCGGACG ACGCCTACAA GTACACGGCG
AAGGGGAACC TCGTGGCGGT CGTATCCAAC GGCACCGCGG TCCTGGGCCT TGGGAACCTG
GGCGCCCTCG CCGGCAAGCC GGTCATGGAA GGGAAAGGTG TCCTCTTCAA GCGTTTCGCC
GACATCGACG TCTTCGACAT CGAGCTGAAC ACCGAGAACC CCGACGAGAT CATCAAGGCC
TGCCAGCTCC TGGAGCCGAC CTTCGGCGGC ATCAACCTTG AGGACATCAA GGCGCCCGAG
TGCTTCTATA TCGAGGAGCA GCTCAAGAAG ACCATGAACA TCCCGGTCTT CCACGACGAC
CAGCACGGCA CCGCCATCAT CTGCTCGGCG GCCCTTCTGA ATGCCCTGAT GCTGGTGCAA
AAGAAGATCG AGGACATAAG GATCGTCGTC AACGGCGCCG GCGCCTCGGC CAACTCCTGC
GCCAAGCTCG CCATCGCGCT CGGTGTGAAA CCCAACAACA TGATCATGTG CGACACCAAG
GGGGTCATCT ACAAGGGGCG CGTCGAGGGG ATGAATCCCT ACAAGGAACT CTTCGCAGCC
GAAACCCACT TCCGCACCCT GGAAGAGGCG GCGGTGGGAG CCGACGTCCT TTTCGGCCTC
TCGGCCAAGG GGGCCTTCAC ACCGGAGATG GTCCGCTCCA TGGCGCCGAA CCCGATCATC
TTCGCCATGG CGAACCCCGA CCCGGAAATC ACCCCGGAAG AGGCGCACGG GGTGCGCGGC
GACGTGATCA TCGCGACCGG CAGGAGCGAC TACGCGAACC AGGTCAACAA CGTCCTCGGC
TTCCCCTTCA TCTTCCGCGG CGCGCTCGAC GTGCGCGCCA CTGCCATCAA CGAGGAGATG
AAGCTCGCCG CGGTGCACGC CCTGGCGAAA CTTGCCCGCG AGGAGGTGCC CGACTCCGTC
AGCAAGGCCT ACGGCAACGA GAAGTTCAGC TTCGGCCCGA CCTACATCAT CCCCAAACCC
TTCGACCCGC GCGTGCTTTT GCACGTGGCC CCGGCGATCG CCCAGGCCGC CATGGACACG
GGGGTCGCGC GCCTGCCGAT CGCCGACATG GGCAAGTACA TCGAGCAGCT CGAGTCCTCG
CAGGGCAAAT CCAAAGAGAT CATGCGCATG ATCATCAACA AGGCGAAGAG CGACCCGAAG
AAGGTGGTCT TCTCCGAGGG TGAGGACGAC AAGATCCTGC GCGCGGCCCA GGTGCTGGTC
GAGGAGGGGA TCGCCAAGCC GATCCTGATC GGAGACCAGA AGAAGATCAA GCAGAAGATG
GACGATCTCA ACCTGGACCT CGACGTGCCG ATCATGGACC CGTCCGACTC CGAGTTCACC
GAGGAGTACG CCGCGGAGCT CTACCGCTTA AGGCAAAGGA AAGGGCTCAC CATTTCCGAG
TGCCGCCGCA TCATGCGCCG CAAGTCGCGG GCACACTTCG GCAACATGAT GGTGCACATG
GGGCACGCCG ACGCTCTTCT GGGCGGGATC GACACCCACT ACCCGGAAAC CATCCGCCCC
GCACTGCAGG TCTTAGGCAA GCAGGGGGGG CTCTCCAGCG TGCACGGCCT CTACATGATG
GTGTCCAAAC AGAACGTCTA CTTCCTGGCC GACACCACGG TGACCATCGA TCCGACCGCG
GAGGAGCTGG CCGAGACGGC CATTCTCGCC GCCGAGATGG TCACCAAGCT CGACATCGAG
CCCCGCGTCG CCATGCTCTC CTTCTCCAAC TTCGGCTCGG TGGACCACCC GCAGACGCGC
AAGGTCAAGC GCGCCGTCGA GATCGTCAAG GAGCGCGCCC CCAACCTGAT AGTAGAGGGT
GAGATGCAGG CCGACACCGC CGTGGTCCCC GATCTTCTGG ACGGCTTCAC CTTCTCGAAA
CTGAAGACCC CGGCCAACAT CCTGATCTTC CCCGACCTCA ACTCCGGGAA CATCTGCTAC
AAGCTCTTGC ACCACCTGGG CGGCGCCGAG GCGATAGGCC CGATCCTCAT GGGGATGAAC
AAGCCGGTGC ACGTACTGCA GCGCGGCGAC GACGTCAACG ACATCGTCAA CATGGCCGCC
ATCGCCGTGG TGGACGTACA GAACCTGTAG
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| Protein sequence | MSKKLGALDY HSSGRKGKIE VIATKPCQTA ADLSLAYSPG VAEPCLAIQE NPDDAYKYTA
KGNLVAVVSN GTAVLGLGNL GALAGKPVME GKGVLFKRFA DIDVFDIELN TENPDEIIKA
CQLLEPTFGG INLEDIKAPE CFYIEEQLKK TMNIPVFHDD QHGTAIICSA ALLNALMLVQ
KKIEDIRIVV NGAGASANSC AKLAIALGVK PNNMIMCDTK GVIYKGRVEG MNPYKELFAA
ETHFRTLEEA AVGADVLFGL SAKGAFTPEM VRSMAPNPII FAMANPDPEI TPEEAHGVRG
DVIIATGRSD YANQVNNVLG FPFIFRGALD VRATAINEEM KLAAVHALAK LAREEVPDSV
SKAYGNEKFS FGPTYIIPKP FDPRVLLHVA PAIAQAAMDT GVARLPIADM GKYIEQLESS
QGKSKEIMRM IINKAKSDPK KVVFSEGEDD KILRAAQVLV EEGIAKPILI GDQKKIKQKM
DDLNLDLDVP IMDPSDSEFT EEYAAELYRL RQRKGLTISE CRRIMRRKSR AHFGNMMVHM
GHADALLGGI DTHYPETIRP ALQVLGKQGG LSSVHGLYMM VSKQNVYFLA DTTVTIDPTA
EELAETAILA AEMVTKLDIE PRVAMLSFSN FGSVDHPQTR KVKRAVEIVK ERAPNLIVEG
EMQADTAVVP DLLDGFTFSK LKTPANILIF PDLNSGNICY KLLHHLGGAE AIGPILMGMN
KPVHVLQRGD DVNDIVNMAA IAVVDVQNL
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