| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1836 |
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| Symbol | |
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| ID | 6781825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2132791 |
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| End bp | 2134275 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642767828 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002138647 |
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| Protein GI | 197118220 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCGT TCGCAACCGG AAGGAAAGTC TGCCTGCTCT TGGTGCTTTT GTTAGCTCTC
TGCTATCCCG TAGCCGCGCA CGCGGCAGTG ACCACAGAGG TCGTGGTCAA CAGGAGCGTG
CTGGTTGATC TGCATACGAA ATCGGAGCGG GTCTCTATCG CTTCTCCCGA CGTTGCGGAG
CTTGTGGTCA TTTCCCCTAC TCAATTGCAG ATCAACGGGA AAAAGGTAGG CTCCACGACC
TTGATTGTCT GGGACACCGC TGGAAAAACC AGCTTCTTCG ACGTTCGCGT CAAGCGAAAT
GAGAGCGTTT TAGAGAGCCA GATCGAGGCA TTGCAGGACC AAATCCAGCA AATGGCTCCA
AAAGACAATA TCAAGGTCGA TTACGCCAAC GACACGATAG TTCTCTCAGG GACGGCCGCC
AATGAACAGA CGGTGGCAAA GGCGCTACAA CTGGCGCAGG CCTATACCGC CGGCAACGGC
TCGAAAGCGG GCGCTCCAGC AACCGACCCA CCCCTCGACA CGTCCAGGTC TTCCTATCAG
TTGTCCGAAA CCCAAACAGG TCGGCAGGGA GGAGACGCTG ACACAGTTAT CACCGTCCTG
AACCACGTTG AGATAGTCGA GCCCCAGCAG GTTCTCCTGG AAGTGAAGGT GGCCCAGGTG
GACAAGACCG CACTGAAGTC ACTGGGGATC AGCGCATTCA TAAGGGGAGC CAGCGCCGAG
GGGTTTTCTA ACCTGGTGGG AGCGCCCGTC GGCGAACTCG CGATTAAAAA CCCTGACGGA
TCCGTCAGAT CGCAGGCCAC CGGCATAGCC GGGCCCATCC CCGGTTTGGC CAATTTCACG
CCTATCGATT CGTACCAGTT GGGCGTCTCG TCGTTCAAGG CCGGCATAGG CGCAGTATTG
AGGGCCCTGG TTACGAAAAA CCTGGCCAAG GTGCTGGCGG AGCCGAACCT GATGGTGCAA
AGCGGACAGG TCGGGAAATT CCTCGCGGGC AGCAAGATCC CCTATTCAAT CGTTTCCGGC
GTCGGCGCTT TATCCGCCAC ATCAATCCAG TTCATCGACG TAGGGGTAAA GCTGAACTTC
AAGCCGGAGG TGCTCGAAAA CGGTCTGATC TCGCTGAAGA TAGACCCTGC CGAGGTTAGC
AGCATAACCG GAGTCCTTGC CGTAAACGGC TACCCCATCA TCGACACACG TGAGGTTCGC
ACCCGCGTCA AGCTTAAGGA TGGCGAAAGC CTGATCCTTG CCGGACTGCT GCAGGAGGAG
GCGATAAAGG CGATGTCCAA GATACCCATT CTGGGGGACA TCCCCATTCT TGGCGCCCTG
TTCCGGTCCA CCCAGGACGA CATAAAGGAA AAGGAACTGG TCTTTTTCAT CACGCCCAAG
CTAGTTACAG CCAGCGCTCC GGGAAGCCGG ATTCTGCTTC CCACGGACAA GCCCCTGACT
CCAGAGCAGG AAAAGGAGCT CCAATGGGTA CCGATTCCAA ATTGA
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| Protein sequence | MEPFATGRKV CLLLVLLLAL CYPVAAHAAV TTEVVVNRSV LVDLHTKSER VSIASPDVAE
LVVISPTQLQ INGKKVGSTT LIVWDTAGKT SFFDVRVKRN ESVLESQIEA LQDQIQQMAP
KDNIKVDYAN DTIVLSGTAA NEQTVAKALQ LAQAYTAGNG SKAGAPATDP PLDTSRSSYQ
LSETQTGRQG GDADTVITVL NHVEIVEPQQ VLLEVKVAQV DKTALKSLGI SAFIRGASAE
GFSNLVGAPV GELAIKNPDG SVRSQATGIA GPIPGLANFT PIDSYQLGVS SFKAGIGAVL
RALVTKNLAK VLAEPNLMVQ SGQVGKFLAG SKIPYSIVSG VGALSATSIQ FIDVGVKLNF
KPEVLENGLI SLKIDPAEVS SITGVLAVNG YPIIDTREVR TRVKLKDGES LILAGLLQEE
AIKAMSKIPI LGDIPILGAL FRSTQDDIKE KELVFFITPK LVTASAPGSR ILLPTDKPLT
PEQEKELQWV PIPN
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