| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1834 |
|---|
| Symbol | |
|---|
| ID | 6781823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2130565 |
|---|
| End bp | 2131695 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642767826 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002138645 |
|---|
| Protein GI | 197118218 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC AGATAACTGC GTTTCTCATA GACAGCGATA CTGCTTCCGC CAGCAAGATC
AACAGCACGC TGATGAGCAT GGAGGGCGAG GCACGCCTGC TCGGTGCAGC TAGGAACCTG
CAGGAGGGGA TGCAGGCAAT TCAAGCCTCC AATCCGAACA TCGTGATCTT GGAGGTCAAC
GACCTGGAGA GGGGAACAAA GGAGACGGAA CTCCTGCTTT CGCGCTGCCC GCAGAGCGCG
GCGTTCATCA GCAGTGCGGC GATGAGCCCC GAGTGGATAC TCAAGCTGAT CCGCGCCGGA
GCCAGCGAGT ATCTGAGTCG TCCTATCCTG GCCGCCGAAC TGATCGACGC GGTCAACAAA
GTGGCGAGGC GGCGGACGGT CAAACATGCG CCAAACACCG GGACTGTCTT CTCCGTCTAC
CATCCGTCGG GCGGGGTGGG CACCACCACC ATAGCAGTCA ACCTGGCGGC GATGCTCTCA
GCCCAGGGAC ACAGCACCGC ACTGGTCGAC CTAAACCTTT ACAGCGGCGA CGTCAGCGCA
TTTCTCGATC TGACGCCCCG CTACACTCTG GCCGACGTCA TGCCCAAGGC GGGCCAGATC
GATGCCAGTT TTCTCAAGAG CGTCATCGCT CCGCATCCAA GCGGTGTGCA TGTCCTGGAC
TGTCCTGGCC ACGTGGCCGA AACGAACCGG ATCACTACTG AACTTCTTCA GGAAGTTATC
GACGTACTGC GCACCATCTT CGAATACACC GTGATCGACA CCGGCGGAGA ACTGTTCGGT
TGCAACCTGG CCACCTTCAA CCTCTCTAAC CGGATCCTCT TCGCAACGGT ACTCACCGTT
CCCTGTTTAA GAACCGCCAA ACGGTACCTA ACTGCCATGG CTGACGTAGG TCTTGGTCCG
GACCGGGTAA AGCTGGTGGT CAACCGTTAC CTTCCCAGGG ACGACATCAG GATTTCCGAT
GCCGAGAAGG TGCTCCGCAC CAAGGCATAT CACATGCTCC CCAACAACTA CACGGACCAC
AAAACCTCCG TCAACAAGGG AGTGCCGCTG GCGCTATATC TAACCAGATC GTCTTTTAGC
AAATCTATGG ACCAACTGGC CCGGCAGTTG TGCCAGGACA GCACCCGCTG A
|
|---|
| Protein sequence | MKQQITAFLI DSDTASASKI NSTLMSMEGE ARLLGAARNL QEGMQAIQAS NPNIVILEVN
DLERGTKETE LLLSRCPQSA AFISSAAMSP EWILKLIRAG ASEYLSRPIL AAELIDAVNK
VARRRTVKHA PNTGTVFSVY HPSGGVGTTT IAVNLAAMLS AQGHSTALVD LNLYSGDVSA
FLDLTPRYTL ADVMPKAGQI DASFLKSVIA PHPSGVHVLD CPGHVAETNR ITTELLQEVI
DVLRTIFEYT VIDTGGELFG CNLATFNLSN RILFATVLTV PCLRTAKRYL TAMADVGLGP
DRVKLVVNRY LPRDDIRISD AEKVLRTKAY HMLPNNYTDH KTSVNKGVPL ALYLTRSSFS
KSMDQLARQL CQDSTR
|
|---|
| |